Francisella tularensis subsp. novicida DPG 3A-IS: CH70_892
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Entry
CH70_892 CDS
T03875
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
fty
Francisella tularensis subsp. novicida DPG 3A-IS
Pathway
fty02024
Quorum sensing
fty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH70_892 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH70_892 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fty03019
]
CH70_892 (hfq)
03036 Chromosome and associated proteins [BR:
fty03036
]
CH70_892 (hfq)
Messenger RNA biogenesis [BR:
fty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CH70_892 (hfq)
Chromosome and associated proteins [BR:
fty03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CH70_892 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Carmo_coat_C
Motif
Other DBs
NCBI-ProteinID:
AJJ47367
LinkDB
All DBs
Position
913378..913707
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AA seq
109 aa
AA seq
DB search
MSRISSLQDPFLNALRKEKVSVSVYLVNGIKLQGQVEAFDQFCIVLRNTVNQMVYKHAIS
TIVPAKSVRMVYSSFNPYHQNSNDEQDENVDDIHSDDLEIQENEGNIHE
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaatatcatctttacaagacccgttcttaaatgctttaagaaaagaaaaagtt
agtgtatctgtatatctagtaaacgggatcaaactacaaggtcaagtagaagcttttgac
caattctgtatcgtacttagaaatactgttaatcaaatggtttataaacatgctatttct
actatagttccagctaaaagtgtaagaatggtttatagctcttttaatccatatcaccaa
aattctaatgatgagcaagatgagaatgtagatgatattcattctgatgatcttgaaatt
caagagaatgaaggtaatattcacgagtaa
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