Fragaria vesca (woodland strawberry): 101291323
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Entry
101291323 CDS
T02666
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101291323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101291323
03036 Chromosome and associated proteins [BR:
fve03036
]
101291323
Spliceosome [BR:
fve03041
]
Complex B
Other components
Prp19-related factors
101291323
Complex C
101291323
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
101291323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
U3_assoc_6
ARM_TT21_C
TPR_8
GrpE
Motif
Other DBs
NCBI-GeneID:
101291323
NCBI-ProteinID:
XP_004295396
LinkDB
All DBs
Position
LG3:3955461..3957548
Genome browser
AA seq
695 aa
AA seq
DB search
MGSDKDADDLTRKNKKINLPKPARVKNKTPNPIQITAEQILREAREQQEPEFRPPKQKIA
DPDEHADNLLRERKKFEDRIRRARQNISEWIKYATWEDKQKDLIRARSVFERAVDVDYKN
STLWIKYAEMEMKNGKKDYARNVLDRAVQYLPRVNQLWYKYVHMEEMIGNVAGARQIYER
WMSWMPEKEDWLAFVKFEVRYNEVERARAIFERYVQCHHGVEAWIRYAKFEVKIGGDVLR
ARNVFERAVEMLADDEGSEKLFVAFAEFEEQCKNVDRARCVYKFGLDHVPKTRAEDLVKK
FVCFEKRYGDREGIEDAIVGTRRFEYEDEVRKNPLNYDSWFDYIRLEESAGNRERIREVY
ERAIANVPPANEKRYWNRYIYLWINYALYEELDTGDVERAREVYRECLNLIPHKKFSFAK
IWILAAKFEIRQLNLTAARSILGNAIGKAPKLKIFKNYIKIELQLGNIDRCRTLYHKYLL
WNMQSFYAWITYAEFEKSLGETERARYLFELAISQQELDNHDEMWKAYIDFELSEFEFDR
ARKLYERQLDWMEQHLEVWIRYAKFEAEALAKDDDDAGFREEKKQSIKRARRVFERALDY
FPASEPDKKEGRSRLLEEWLNMEASFGNLGDFSLVQPMLPKKLKRRRQIETEDGSAGYQE
YIDYLFPEESEKTNLKILEAAYQWMKKRKFSPEDF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgacaaagacgcagacgacctaacacgaaagaataagaagatcaacctacca
aaaccagctagggttaagaacaaaacaccaaaccctatccaaatcaccgccgagcaaatc
ctccgggaggcccgtgagcaacaggagccagaattccgacctcccaaacagaaaatcgca
gacccggatgagcatgcagataatcttctccgagaacgtaagaaattcgaggaccgaatc
cggcgagcaaggcagaatatcagtgagtggatcaagtatgcaacatgggaggataagcag
aaggacttgatacgtgcacgctctgtgtttgagcgagccgtcgatgtagattataagaac
tccacgctttggatcaagtatgcggagatggagatgaaaaacggaaaaaaagactatgct
aggaatgtgttggaccgtgccgtccaatacttgccgagagtaaaccagctttggtacaag
tatgttcatatggaagagatgattgggaatgtggccggtgctcgacagatttacgagagg
tggatgagttggatgccggagaaggaagactggctcgcgtttgtcaagtttgaggtccgg
tataatgaagtcgagcgtgctagagcgattttcgagaggtatgtacaatgtcatcatggg
gttgaagcttggattcggtatgccaagtttgaggtgaagattggtggtgatgttctgagg
gctaggaacgtgtttgagagggcagttgagatgctggctgatgatgaagggtccgagaag
ctgtttgttgctttcgctgagtttgaagagcaatgcaaaaatgttgatcgagcaaggtgt
gtttataaatttggattggatcacgtaccgaaaactagagctgaggatctggttaagaag
tttgtgtgctttgagaagcgatatggggatagagaaggtattgaggatgctattgtggga
acgaggaggtttgagtatgaggatgaggttaggaagaatcctctaaactacgactcctgg
tttgattatataaggctagaagagagtgcagggaatagggaaagaattcgagaggtgtac
gagagagctattgccaatgttcctccggctaatgagaagcggtattggaaccgatatatt
tatctgtggattaattatgcactatatgaggaacttgataccggagatgtggaacgtgca
cgagaggtctacagagagtgccttaatctgattcctcataagaaattctcgtttgcgaaa
atatggattcttgctgccaagtttgagattcgacagctgaatctcaccgccgcacggagc
attcttggtaatgctataggcaaggcacctaaattgaagatatttaagaactacattaaa
attgagctgcaacttggaaatatagatcgttgtcggacgttgtatcataagtatttgctt
tggaatatgcagagtttttatgcatggatcacgtatgcagagtttgagaaatctttaggt
gaaacagaacgagcaaggtacctttttgaactcgcgatcagccaacaagagcttgacaat
catgatgaaatgtggaaggcctacatcgactttgaactgtctgaatttgagtttgacaga
gccagaaaactttacgagagacagctagactggatggagcagcacctggaggtgtggata
cgttatgcaaaatttgaggcagaagctcttgccaaggatgatgatgatgctggctttcgt
gaagagaagaaacaaagcatcaagcgtgctagaagggtttttgagagagctctcgactat
tttccagcttcagaacctgataagaaggaaggaagaagtaggttgttagaagaatggttg
aatatggaagctagctttgggaatttgggtgattttagcttagttcaacctatgctgcca
aagaaactaaagagaaggaggcaaatagaaactgaagacggttctgccgggtaccaggaa
tacatcgattacttgttcccggaagaaagtgagaagacaaatctcaagattttagaagct
gcctaccagtggatgaagaaaagaaaattttctccagaagatttttaa
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