Fragaria vesca (woodland strawberry): 101295928
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Entry
101295928 CDS
T02666
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00906
Carotenoid biosynthesis
fve01100
Metabolic pathways
fve01110
Biosynthesis of secondary metabolites
Module
fve_M01040
Lutein biosynthesis, plants, lycopene => lutein
fve_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
101295928
Enzymes [BR:
fve01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
101295928
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
HI0933_like
FAD_oxidored
Pyr_redox
NAD_binding_8
Pyr_redox_3
Trp_halogenase
FAD_binding_2
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-GeneID:
101295928
NCBI-ProteinID:
XP_011467335
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Position
LG6:complement(23077564..23079452)
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AA seq
497 aa
AA seq
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MDTLLKTHNKLEFLHPLHGLSEKVSNWNSSKQELRCGLRKSCRTGRVKARSSALLELVPE
TKKENLEFELPLYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN
YGVWVDEFEAMDLLDCLDTTWSGAVVFIDEHSKKDLDRPYGRVNRKQLKSKMLQKCISNG
VKFHQAKVNNVIHEEDKSLLVCSDGVTIQATVVLDATGFSRCLVQYDKPYNPGYQVAYGI
LAEVEEHPFDVDKMVFMDWRDSHLRNSPQLKERNSKIPTFLYAMPFSSNRIFLEETSLVA
RPGLPMKDIQERMVARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHP
STGYMVARTLAAAPIVANAIVQYLGSGRSISGNELSAEVWKDLWPIQRRRQREFFCFGMS
ILLKLDLNATRRFFNAFFDLEPRYWHGFLSSRLFLPDLLFFGLSLFSHASNASRLEIMGK
GTIPLVKMINNLIQDRD
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggatacattactgaaaacacataacaagctcgagtttctgcacccacttcatgggctt
tcagagaaagtgagtaattggaactcttcaaagcaggagcttagatgtggtctcaggaag
tcctgtagaactggccgtgttaaggccagaagtagtgctcttctggagctggtgcctgaa
accaagaaggagaatctcgaatttgagcttcccttgtatgacccatcaaagggtcttgtg
gtggaccttgcagtcgtgggaggcggccctgcagggcttgccgtggcacagcaagtctcc
gaggcagggttatctgtttgctcgattgatccctctcccaagttaatctggcccaacaat
tacggtgtttgggtggatgagtttgaggccatggatttgcttgattgcctcgacactacc
tggtctggtgctgttgtgttcatagatgaacattcgaagaaggatcttgataggccttat
gggagggttaataggaagcagctcaagtccaaaatgctgcagaaatgcatttcaaatggt
gtcaagtttcatcaagctaaagtcaataacgttattcacgaggaggacaaatcactcttg
gtttgcagtgatggcgtcacaattcaagctactgtggttcttgatgcaacaggcttttca
agatgccttgtgcagtatgataagccttacaatccaggttaccaagtggcgtatgggatt
ttggcagaagttgaagaacatccttttgatgtggataagatggttttcatggattggaga
gattcacatttgaggaatagtcctcaactgaaagagagaaatagtaagatccctactttt
ctatatgcaatgcctttttcatccaataggatatttcttgaagaaacgtccctagttgct
cggccaggactacccatgaaagatatccaggaaaggatggttgctagattgaaacaccta
ggcataaaagttaagagcatcgaagaggatgagcattgtgtcattccgatgggcgggcct
ctaccggtgctccctcaaagagttgttggaattggaggtacagctgggatggtgcaccct
tcaacagggtatatggtcgcgaggactctggcagcagctcctattgttgcaaatgcaata
gttcagtaccttggttctggtagaagtatttcaggaaatgaactgtcagcagaagtgtgg
aaagatctatggcccatacaaaggaggagacaaagggagttcttctgttttggcatgtcc
attctgctcaagctggatttgaatgccacaagaaggtttttcaatgcattttttgatcta
gaacctcgttattggcatggattcttatcatctcgactgtttcttcctgatcttcttttc
ttcggcctttcactgttttctcatgcttcaaatgctagtaggctagaaataatgggaaag
ggtactattcctttggtaaagatgatcaacaacttgatacaggatagagattag
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