Fragaria vesca (woodland strawberry): 101296122
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Entry
101296122 CDS
T02666
Name
(RefSeq) uncharacterized LOC101296122
KO
K14827
pre-rRNA-processing protein IPI1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101296122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101296122
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
101296122
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
101296122
NCBI-ProteinID:
XP_004303376
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Position
LG6:20363425..20373674
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AA seq
882 aa
AA seq
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MARSKNPSKKQQKRGGIDFKKIKRKIGRKLPPAQNATNTEIKSKAIVLPEQSVASEKAGL
AVNKKGLTLKELLQQTSHYNSKVRKDALLGIKDLFLKHPEELRLHKYTVIEKLRERIGDD
DRLVRETLYQLFKLVIFPGFKEDNQELFVSLMMAYIFNSMTNLAIDVRLMAFKFLELVIQ
YYPPSFFLYAEKILQNFEDILRKNQFFLEDKSKLKTALSGLERCLLLLPCNKKEVGSCKQ
SDAVEGMLHGFEPHVPAESAGFSIIIPKLKDLVPVLVNCFQDFIPAVQTGSHLDVQSYDC
MLSILHSIKHAVQFFVYMTDEGMSESRPSHGELDVAMLGGTISIMLMKKLLVLFPLNMRN
QLSEKDDVKYFVLDSVMTEIFLHLGKWICPPGILLEKFLEFLENALLGKICSDRRSGKAI
QEKHLISLLPFVPKLVSQVPNDWKSRLLQAFTNAFKDCNPVSSLKLACLSTMEEMVVPRQ
GLLYLDPRDPEILNFQIAWIRELPMLLILLGDKNTSHSQVVLHLLLRLGQRAFMNYSFAL
EYDNMQFSLQGFFCIYQDDGNIIYGPFVKLPRESQELSLCCLRYISNLDLHTLRSIAYCC
LCPELEQFVVIRVIEILHSAYKSGHIQIADHISFFITLLSRFRVLPENVNVVKEKDVNIS
NQGTFKSITSIVCSCLSQMGDSSLVFKLLEKMVLDQLSQTLPLDNVCAMLRMLIALDSEE
TIISEQAFVSLVEILPRYLIDIVHCIADDDEKASGSSFFSAYFYYLVPCFFLFVKSHKLL
GIVLKMLGSWINESLSILPCDHTHYETDISSRVEVIVSVLLLLHNDEKIGRIMSSFKAEI
DYILQSIISIQSSEEISMTIQEKHQVKCAHDRLKNVTSAQSV
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcacgctctaagaatccgtcaaagaagcagcagaagcgcggcggcatcgacttcaaa
aaaataaagcgaaagattggcagaaaattgccaccagcacagaatgctacaaatactgaa
attaaatcaaaagcaattgttctccccgagcagagtgtggcatcagagaaggcaggatta
gcagtaaacaagaaaggcttgacattgaaagaacttcttcaacagacatctcattacaat
tcaaaagtccgtaaagatgcattgttgggtatcaaggatttattccttaagcatccagaa
gagctgaggttgcataagtacaccgttattgaaaaactgcgtgaacgcattggtgatgat
gatagacttgttcgagaaacgctgtatcaacttttcaagttggtgattttccctggtttt
aaggaggataatcaagagctttttgtttccttgatgatggcctatatatttaactcaatg
acaaatttagcaattgatgttcgactgatggctttcaaatttttggagcttgttatccag
tattatccaccttcctttttcttgtatgctgaaaagattcttcaaaactttgaggatatt
ttgcgaaagaaccagttctttttagaggacaagagcaagctgaagactgctctttctggg
ttggagcgatgcttgttactgcttccatgtaacaagaaagaagttggctcatgtaaacag
agtgatgctgtagaagggatgctgcatggttttgagcctcatgtgcctgcagaatctgct
gggttttctatcatcatcccaaaactaaaagacttggtgccagttctagtcaattgtttc
caagattttattcctgcagtacagactggttctcatcttgatgtgcaatcatatgattgt
atgttgtcgatacttcacagtataaagcatgcagtccaattctttgtttatatgactgat
gagggtatgtcggaatcacgaccttctcatggggagcttgatgtggctatgttgggtggg
actatctccataatgttgatgaagaagttacttgttctgtttcccctgaacatgagaaat
caactttctgagaaggatgatgttaaatattttgtcctggacagtgtgatgacagaaata
tttctgcacttaggcaaatggatctgccctcctggtattctgttggagaaatttttagaa
tttctagagaatgctctgcttggaaagatctgtagtgacagacgctctggtaaagcaatc
caggagaagcatttaatttcgcttcttccttttgttccgaaacttgtctcgcaagtgcca
aatgactggaagtctcgtcttcttcaggcttttactaacgcattcaaggactgcaatcct
gtgtcgtctttaaaattggcttgtctttccacaatggaggagatggttgttcctagacaa
ggcttgctgtacctggatcccagggatcccgagatattaaactttcagattgcctggata
agagagcttcccatgttgctaatcctgctgggtgataaaaacacgtcccattcccaggtt
gtgttacaccttttacttcgcctgggacagcgtgctttcatgaactattcatttgctttg
gaatatgacaacatgcaattctcactgcaaggatttttctgcatatatcaagatgatgga
aatataatatatggtccctttgtaaagctgcccagagaatctcaggagctctctctttgt
tgccttcgttatatctctaatttggatttgcatacgttgaggtcaatagcttattgttgc
ctatgtccagaactggaacagtttgtagtgattcgagtcatagagatcctgcattcagct
tataaatctgggcatattcaaattgcggatcacattagtttcttcatcactttgctgtct
cgattcagagttctcccagaaaatgttaatgttgttaaagagaaagatgtgaatatctca
aatcaggggacttttaaatcaatcaccagcattgtttgctcatgcctgtcacagatgggt
gatagttctcttgtttttaaactactagaaaagatggtactagatcaactgtcgcaaacc
cttcctctggacaatgtctgtgctatgcttaggatgcttattgcactggactctgaagag
acaataatttctgaacaagcttttgtaagcttagtcgaaatccttccgcgatatcttatt
gacattgtgcattgcattgctgatgatgatgagaaggcctctggttccagtttttttagt
gcatatttttattatcttgttccttgctttttcttatttgttaaaagtcacaaacttctg
ggtatcgtgttgaagatgttggggtcatggataaacgaaagtttgtcaattttaccttgt
gatcatacccactatgaaacagacatttcaagcagggtagaagtgatcgtgtcggttctt
ctgttgttgcataacgatgaaaaaattgggcgaatcatgtcttcgttcaaggcagagatt
gactatattttgcaaagcatcatctctatacagtcctcggaggaaatcagcatgaccatc
caagaaaagcaccaagtgaaatgcgcacatgatagactaaagaacgtcactagtgcacaa
tcagtctag
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