Fragaria vesca (woodland strawberry): 101300650
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Entry
101300650 CDS
T02666
Name
(RefSeq) chaperone protein ClpB3, chloroplastic
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fve03110
]
101300650
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP100
101300650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
AAA_14
AAA_7
IstB_IS21
Zeta_toxin
TniB
AAA_18
Mg_chelatase
AAA_28
AAA_24
Torsin
NBD_SMAX1
Motif
Other DBs
NCBI-GeneID:
101300650
NCBI-ProteinID:
XP_004304250
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All DBs
Position
LG6:31324732..31330537
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AA seq
983 aa
AA seq
DB search
MASTTTSFAAPGVVALRLPQSKCCTKASLFPHPNPSVSLRARPHFLRGLTSCRFDPNSPF
QTGSGRMTRSPNQFVVRAMASSAGRGQITQQDFTEMAWQAVVSSPEVAKENKHQIVETEH
LMKALLEQKNGLARRIFAKAGVDNTQLLEATDKYIQRQPKILGETAGSMLGRDLEALLER
ARDYKKEYGDSFVSVEHLVLGFIQDQRFGKQLFKEFQISKQSLKSAIESIRGRQSVIDQD
PEGKYESLEKYGKDLTAMARQGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKT
AISEGLAQRIVQEDVPQALMNRKLISLDMGSLIAGAKYRGEFEDRLKAVLKEVTESEGQI
ILFIDEIHTVVGAGATSGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRF
QQVYVDQPTVEDTISILRGLRERYELHHGVRISDGALVEAAILSDRYISGRFLPDKAIDL
VDEAAAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASRERLNRLEAELSVLKE
KQSQLSEQWEHEKSVMTRIQSIKEEVDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQL
LSAEKELDEYIRSGKSMLREEVTGNDISEIVSKWTGIPVSKLLQSEREKLLHLEEELHKR
VVGQDPAVKSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKTLASYMFNTEEAL
VRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEVVRRRPYSVILFDEIEKAHSDVFNV
FLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNGDDDVSPKELGYETIKQRVMEA
ARSVFRPEFMNRVDEYIVFQPLDRDQINNIVRIQLERVQRRIADRKMKIQVSDAAVQLLG
SLGYDPNYGARPVKRVIQQYVENELAKGILRGEFQEEGTILVDTEVTAYGNGQLPQQKLV
FKTLETGSESPAAENKGALSGAV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcctccacgaccacctccttcgccgctcccggagtcgtcgctctccgtcttccccag
tccaaatgttgcaccaaagcttctctctttcctcacccaaacccctccgtctccctccgc
gcccggccccacttcctccgcggactcacttcctgccgattcgacccgaactcccctttt
caaaccgggtcgggtcggatgacccggagcccgaaccagtttgttgtgcgcgccatggct
tcttcagctggaaggggacagattacgcagcaggattttactgagatggcgtggcaggcg
gtggtttcgtcgccggaggtggccaaggagaacaagcatcagatagtggagactgagcat
ttgatgaaggcgttgttggagcagaagaatggacttgctaggaggattttcgctaaggct
ggggtggataatactcaacttcttgaggctactgataagtatattcagcgccaaccaaag
attcttggtgaaactgcgggatcaatgttaggacgggatttggaagccttgcttgagcga
gccagggattacaagaaagagtatggagactcatttgtgtctgtggagcatttggttctt
ggtttcattcaagatcaacgatttgggaagcaattatttaaggaatttcaaatctccaag
caatctttgaagtctgctatagaatccataaggggacgccaatcagttattgaccaagat
cctgaggggaaatatgagtcccttgaaaagtacggaaaagatctgacagccatggcaaga
caaggaaagcttgacccggttataggaagagatgatgaaatccgcaggtgcatccagatt
ctgtcaagaagaacaaagaacaacccggtgctaattggtgaaccaggtgttgggaaaact
gcaatttcagaagggcttgctcagcgtattgtgcaagaggatgtcccacaagctttgatg
aatcgtaagctaatctctcttgacatgggttcactaattgctggggcaaaataccgtgga
gagtttgaggataggctgaaggctgtactcaaggaagtaacagaatctgaaggccagatt
atcctttttattgatgaaattcacacagttgtcggggcaggagctacaagtggtgcaatg
gatgctggaaatcttttaaaacccatgcttggtcggggagagttgcggtgtataggtgca
acaacactggatgagtatcgcaaatatattgagaaagatccagcgttggagcgtcgtttt
cagcaagtttatgttgatcaacctacagttgaggatacaatctcaatactccgaggactg
cgtgaaagatatgagttgcatcacggggtccgcatttctgatggtgcacttgtggaagct
gcaattctctcagaccgttacatcagtgggagatttttacccgacaaagctatcgactta
gttgatgaagctgctgccaaattgaaaatggaaattacatcaaagcccacagcgctagat
gagattaatcgttcagtgttgaaacttgaaatggaaagactgtcacttacaaatgacacc
gacaaagcatccagagagagattgaaccgccttgaggcggagttgtccgtcttaaaagag
aaacaatctcagctgtctgagcagtgggaacatgagaagtctgttatgactcgaattcag
tcaatcaaggaagaggttgacagggtaaatctggagatccagcaggctgaacgagagtat
gatcttaaccgtgctgctgagctgaagtatgggagtttgaattccttacagcgccaactc
cttagtgctgaaaaagagctcgatgagtatatcaggtctgggaaatcaatgctgagagag
gaagttacgggaaatgacatttctgaaattgtcagcaagtggactggtattcctgtttcc
aagcttctacagtcagagagggaaaagctcttacatttggaggaagagctgcataaacgt
gttgtaggacaggatcctgctgtgaaatcagtagctgaagctattcagcggtctcgagca
ggtctctcagatcctcatcgcccgattgctagtttcatgttcatgggccccaccggtgta
gggaagacagaactagccaagacccttgcctcctacatgttcaacactgaagaagctctt
gttagaattgatatgagtgagtacatggaaaagcatgctgtgtcaagactgataggtgct
ccacctggctatgtgggttatgaggagggaggacagctgacagaggttgttcgccggagg
ccatattcagttatcctgtttgacgagattgaaaaggcgcattctgatgtgttcaatgtt
ttccttcaaattttagatgatggaagagtaaccgactcacagggccgcactgtgagtttc
accaacactgtgatcattatgacctcaaatgttggttcacagtatatactaaacggagat
gatgacgtctcgccgaaggaattgggttatgaaactataaagcagcgggtgatggaggct
gcaaggtccgtatttcgccccgagttcatgaatcgggttgatgagtacatagttttccag
cccttggaccgtgatcagataaacaatattgtcaggatacagttggaacgagtccagagg
aggattgcagaccgcaagatgaaaatccaagtgagcgatgctgctgtgcagcttcttgga
agtcttggatacgatccaaactacggtgctaggccagtaaagcgagtgattcagcaatat
gtagaaaatgagcttgccaagggcatcttgagaggagagttccaagaagaaggcaccatt
ttggtcgacacagaggtcacagcgtatggcaacggccagctcccccagcaaaagctagtc
ttcaagacgcttgagactggttcagaatctcctgcagctgagaacaagggagctttgtca
ggcgctgtctga
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