Fragaria vesca (woodland strawberry): 101303279
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Entry
101303279 CDS
T02666
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101303279
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fve01007
]
101303279
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101303279
Enzymes [BR:
fve01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
101303279
Amino acid related enzymes [BR:
fve01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101303279
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101303279
Prokaryotic type
101303279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Sigma70_ner
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
101303279
NCBI-ProteinID:
XP_011470407
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All DBs
Position
LG7:complement(22868634..22876854)
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AA seq
966 aa
AA seq
DB search
MAKQYSPAAVEKGWYPWWENSGCFKADAKSSKPPFVIALPPPNVTGKLHIGHALTAAIED
TMIRWRRMSGFNALWVPSMDHAGIATQVVVEKKLMRERNLTRHDIGREEFVSEVWKWKNS
YGDAILQQLRRLGASLDWSRECFTMDEKRCKAVTEAFVRLYEKELIYRDNRLVNWDCILR
TAISEIEVDYIDIKERTFLEVPGYENRVEFGVLTSFAYPLENNLGEIVVATTRIETMLGD
TAIAVHPDDDRYKHLHGKHAIHPFNGRRIPIICDAILVDPEFGTGAVKITPAHDPNDFNV
GKRHNLGFINVFTDDGKINQDGGEFAGMPRFKAREAVTEALKKKGLFKESTANEMRLGVC
SRSKDVVEPMIKPQWYVKCSGMAKGALDAAVDDDNKKLDIIPRQYNADWKRWLENIHDWC
VSRQLWWGHRIPAWYVVFDGDKPEDFGSLDDRWVVARNKEEAKALASQRYKGKEFKLEQD
PDVLDTWFSAGLFPMSVLGWPEDTEDLRAFYPTSVLETGHDILFFWVARMVMLGSTLGGN
VPFSKVYLHPMIRDAHGRKMSKSLGNVIDPLDVINGISLEDLHKKLSEGNLDPRELAVAK
EGQKKDFPDGIAECGSDALHFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSK
LGDDYVPASSVVPDLLPFSCRWILSVLNEAISKTVLSLESYEFSDAATAVYAWWQYQLCD
VFIEAIKPYFAGNDPKFTSERAFARDTLWLCLDNGLRLLHPFMPFVTEELWQRLPSSKHH
SRPASIMICDYPSIVECWTNDRVESEMSLIDSIVRSLRSLSQESRERRPAFVLCRSMSDG
EIICRQQLEIETLANLSSLMVISENDPAPTGCAVSVVNESLSVYLKILGSRSAEIDLEKI
RKKMEDIKLQHEKLTKVMNAAGYKEKVPEKIQKANADKLESLKKEKLSLEEASQHMEAQI
SSSKQN
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagtacagtccagctgccgtggagaaagggtggtatccgtggtgggagaat
tcggggtgctttaaagcagatgctaagagctctaaacctccgtttgtgattgctttgccg
cctccaaatgtgaccggcaagcttcatattggccatgctcttactgctgctattgaggac
acgatgattcgttggcgaagaatgtcaggtttcaatgccttgtgggtgccttcaatggac
catgctgggattgcaactcaggttgttgtagaaaagaagctgatgcgtgagcgcaatcta
acccggcatgatattggccgtgaagagtttgtatctgaagtttggaaatggaaaaatagt
tacggggacgctattttacagcagctacggcgtttgggtgcttcattggattggtcccgt
gagtgctttacaatggacgagaagaggtgtaaggctgtgacagaggcttttgtgaggctt
tatgagaaagagctcatctacagggataaccgcctggtgaactgggattgtatcttgcga
acagcgatatctgaaattgaggtggactatatagatatcaaagaaagaacattccttgag
gttcctgggtatgagaaccgtgttgaatttggtgttttgacatcatttgcataccctctg
gaaaataatttaggtgagatagttgttgccacaactagaattgaaactatgctcggtgat
actgctatcgctgtacatccagatgatgacagatataagcatcttcatggaaagcatgcc
attcatccatttaatggaagaaggattcctataatctgtgatgcaatcctggtggatcca
gagtttgggactggtgctgtgaagattactccggcccatgatcctaatgactttaatgtc
ggaaagcgccataatcttgggtttataaacgtctttactgatgatggaaaaataaaccag
gatggtggagagtttgcggggatgccacgcttcaaagcccgggaggcagttactgaagca
ttaaagaagaagggcctctttaaagaatcaacagcaaatgagatgcgtcttggtgtatgc
tctagaagcaaggatgttgttgaacccatgataaagccccagtggtatgtcaaatgtagt
ggtatggccaagggagctcttgatgctgctgtagatgatgataataaaaagcttgacatc
atcccaagacagtataatgctgattggaagagatggctcgagaacattcacgattggtgt
gtctcacggcaactttggtggggtcaccgcattcctgcatggtatgtcgttttcgatggt
gacaagccagaagattttggatcattagatgaccgatgggtggttgcaagaaacaaggaa
gaggctaaagcactggctagtcaaagatacaaggggaaggagtttaaactagaacaagat
cctgatgtgcttgacacatggttttctgctggtctcttcccaatgtccgtgttggggtgg
ccagaagatacagaagatttaagagctttctatccaacttcagttcttgaaactggtcat
gacattctttttttctgggttgctcgtatggtcatgcttggaagtacattgggtggtaat
gtacctttctcaaaggtgtacttgcatccaatgattcgcgatgcacatggacgtaaaatg
tccaagtccttggggaatgtcattgatcctcttgatgtgataaatggtatttcgctggaa
gatctgcacaaaaagctttcagagggaaatttggaccctagagaactagccgtagccaaa
gaaggccaaaaaaaggatttccctgatggtattgctgaatgtggttctgatgcgctacat
tttgccctggtgtcatacactgctcagtctgataagataaatctggacatccaaagggtt
gtgggttaccggcagtggtgtaataaactttggaacgccgtacggtttgctatgagcaaa
cttggggatgattatgttccggcgtcatcagtagtcccggatctgcttccatttagttgc
cggtggatactctcggtactaaatgaagccatctccaaaactgttttgtcattggaatca
tacgagttttccgatgcagccactgcagtgtatgcttggtggcagtaccaattgtgtgat
gtgttcattgaagccataaaaccctactttgctggaaacgatccaaagtttacatctgaa
agggcttttgcacgagacacgctctggttgtgtctggacaatggactacggctgcttcat
ccatttatgccctttgttactgaagaactatggcagcgtctcccatcatccaagcatcac
agtaggccagcatcaattatgatatgcgactatccgtccatcgtggagtgctggacaaat
gatagggtggagtctgaaatgagtctaattgactctattgtgagatctctccggtcacta
tctcaagagagtcgtgaaagacgaccagcttttgtgctgtgtcgatcgatgtcagatggg
gaaattatatgcagacaacaactcgagattgaaactcttgcgaatctgtcatctctgatg
gtaatcagtgagaatgatcctgctccaactggatgtgctgtgtctgttgtaaatgaaagc
ctatctgtttatctgaagattctaggatctcgttcagcagaaatagatcttgaaaagatc
cgaaaaaagatggaagacattaaattgcaacatgagaagctaacgaaggtgatgaatgct
gctggttacaaagaaaaggtccccgagaagattcaaaaggccaatgctgataaacttgag
tccctcaagaaggagaaactgtctcttgaagaggcaagccaacatatggaagcgcagata
tcgagcagtaaacaaaactga
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