Fragaria vesca (woodland strawberry): 101310809
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Entry
101310809 CDS
T02666
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101310809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101310809
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101310809
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GFIT
Motif
Pfam:
UFD1_N2
UFD1_N1
CDC48_2
Rho_RNA_bind
Motif
Other DBs
NCBI-GeneID:
101310809
NCBI-ProteinID:
XP_004301638
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Position
LG5:20023538..20025569
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AA seq
353 aa
AA seq
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MASSRPEDRMNPNWIRQRMIEMEIERDPPLNRSYRCYSGTYLKDFYLNADQAAKLEAGDK
IFMPPSALGILSPLNLPIMLFQLRNPKAADRELVSHCGVLEFIAEEDTIYMPSWKMRSLQ
LEEGDAVHVKIAFLPKGRFVKFQPHTTSFLDITNPRAVLEKTLRTFTCFTTGDTIMLPYN
GKEYYVDIVETKPPRGISIVDTDCEVDFVAPLDYKEPEKPVAAASPPTNKAALVAPDQVE
EPKFSPFTGAGRRLDGKPLPPPPISSSSFVAAASNGKGDAQLSSTGSSSQGTSGRAHGKL
VFGTNNAAANRATNSTNSQKEIEKKASKEQAKPEKKEPPKFQPFTGKGYSLKG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcacgcccggaggatcggatgaatccgaattggatacgtcaacggatgatt
gagatggaaatagagcgtgatccacctctcaatcgaagttatcgctgctattctggaact
tacttgaaagatttttacttgaacgcagaccaagctgcaaaacttgaagccggtgataaa
atctttatgccaccctcagctctaggaatcctttcacctctaaatctgcccattatgctc
ttccagctacgaaaccctaaagctgccgacagagagctggtatctcactgtggggttttg
gagttcattgcggaagaagacacgatctatatgccttcctggaagatgaggagcctgcaa
ttggaagagggagacgctgttcacgtcaagattgcctttcttccaaagggcaggttcgtt
aaattccaaccccataccacgagctttttggacatcacaaatccgagagctgtgttggag
aaaacactgaggacttttacatgtttcactactggggatactatcatgctgccgtataat
ggcaaggaatactatgtggatatcgtagaaacaaagcctcccaggggcataagcattgtt
gacacagactgtgaggttgactttgtggctcctctcgactataaggaacccgaaaagcct
gttgccgcggcttctcctccaacaaacaaggcggcattggtggcacctgatcaggttgaa
gagcctaagttcagcccttttaccggagctggaaggcgtttggatggaaagcctttgccc
cctcccccaatttcttcttcctcattcgttgcggcagccagtaatggtaagggtgatgcg
cagctgtcttctacaggatctagctcacaaggaaccagtggtcgagctcatggaaagctt
gttttcggaacaaataatgccgctgccaaccgtgctactaatagtactaattctcagaag
gaaatagaaaagaaagcttcaaaagagcaggctaagccagaaaagaaagaaccaccgaag
ttccagccttttacagggaaagggtactcattaaagggttaa
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