Fragaria vesca (woodland strawberry): 101312067
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Entry
101312067 CDS
T02666
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fve03032
]
101312067
03400 DNA repair and recombination proteins [BR:
fve03400
]
101312067
Enzymes [BR:
fve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101312067
DNA replication proteins [BR:
fve03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101312067
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
101312067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
UBA
Motif
Other DBs
NCBI-GeneID:
101312067
NCBI-ProteinID:
XP_004302399
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All DBs
Position
LG6:4806071..4811607
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AA seq
893 aa
AA seq
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MHNMNGNGVSGDEVIAKLLEMGFENSSVVEAVKEVGPSFDVALEFILNGCCRSNQRASSS
STSKAKAPGKRALPSSKPLGQIRQSSILDHFQSSSAPKRRKTDVVPDVPVFGSESVHGSV
DQCVEVLSELPSVGCLDIGSDWEKKAESLLQKHFGFFSLKPFQKEVLAAWLAHKDTLVLA
ATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLRLAKHGVSACFLGSGQPDSTVENK
AMKGVYNIIYVCPETILRLIKPLQNLVEIRGIALFAIDEVHCVSKWGHDFRPDYRRLSEL
RKNFSASNLKFLDFDIPLMALTATATIQVREDILNSLSMSKETKVVLTSFFRPNLRFRVQ
HSKTSTSSYENDFLDLIDMYMDKRGKGEKKQLITSEEVNEVLDSSSNSSVSEADCNSENE
LDNIEDGNYDRFDEANALQENGSSASKGRELSVDYLENEVDVFQSVDDWDVSCGEFCGLP
LCEDMNTRKETTSDVLELPNQPEERLRFLQQPLEKGSTIIYVPTRKQTLKIATYLCRCGL
KAAAYHAGLPKSRLRQVHKMFHENTIEVVVATIAFGMGIDKLNVRRIIHYGWPQSLEAYY
QEAGRAGRDGKLADCILFANLTRAPSLLPSRRSEEQTKQAYRMLSDCFRYGMASSCCRAK
KLVEYFGEDFSHDKCLLCDVCVTGPPEMQNFRKEADVLLQVIAAHDRQGRYKNNDIISND
IRRESYTGRLNLRMIVSKIREQSQQFMATQLLWWQGLLRIMEGKGFVREEDDKTHVQLKF
PKLTELGLEFLLSEKEKSFYVHPEADMLLSASMPKSFSTFSEWGKGWADPEIRCQRLESF
QHNRSPQSSFGKRGKRKSRKQRTRKSSASSQSVRTVRGRIEAKLSKQSIRPRS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgcataatatgaatggcaatggcgtatcaggcgatgaagtcattgcaaagctgcttgaa
atgggattcgagaattccagtgtagtagaagctgtgaaagaagttgggccgtcttttgat
gttgcattggagtttatactgaatggttgttgtagaagcaatcagagagcatctagtagt
tccactagcaaggcaaaggctcctgggaaaagagctttgccctcctcgaaaccgttggga
cagattcggcagtctagcatactggatcatttccaatcctcaagtgcacctaagcggagg
aagactgatgtggtacctgatgtaccagttttcgggtcagaaagtgtacatggttctgta
gaccaatgtgtggaggttttatcagaattgccttcggttggttgcctggacattggttca
gattgggagaagaaagctgagagtctcttgcaaaagcattttggttttttttcattaaaa
cctttccagaaggaggtgttagctgcttggttggctcacaaagatacacttgttcttgcg
gcaacaggatctggtaaatctctgtgtttccagattccagcattgttgactgggaaggta
gttgttgtgatttcaccattaataagcttgatgcacgatcagtgcttaaggctggcaaaa
catggggtttctgcttgcttccttggatctgggcaacctgacagtaccgtggaaaataaa
gcaatgaaaggcgtgtacaacataatatatgtttgccccgagacaatcttaaggctgata
aaaccactccagaatttggtagaaatccgtgggattgctctttttgcaattgatgaagtc
cattgtgtttcgaagtggggccatgattttcggcctgactacaggagattgtctgagttg
cgaaagaacttcagtgctagcaatttaaaattcttagacttcgatataccactgatggca
ttgactgctactgcaacaattcaggttcgtgaagacattcttaattcattgtccatgtca
aaggaaacaaaagttgtgcttacttcatttttccggccaaatctaagattcagggtacag
catagtaaaacatcaacatcatcatatgagaatgatttccttgacctgatagacatgtat
atggacaagagaggaaaaggtgaaaagaaacaattgatcacctcagaagaagtaaatgaa
gtgctggacagctcatctaacagtagtgtgtcagaggctgattgcaattcagagaatgag
ttggacaatattgaggatggtaattatgacaggtttgatgaagcaaatgcactccaggaa
aatggttcaagtgcttcaaagggaagggaactgtcagttgactacttggagaatgaagtt
gatgtctttcagagtgtggatgattgggatgttagctgtggtgaattctgtggactacct
ctttgtgaggacatgaatactagaaaagaaactacatctgatgtacttgaattaccaaat
caaccggaagaaagactgagatttctgcagcagcctctagagaaaggatcaactatcata
tatgttcctacaagaaaacaaacgttgaaaattgcaacttatctttgtaggtgtggattg
aaggctgctgcctatcatgcagggttgccaaaatcacgtttaaggcaggttcacaagatg
tttcatgaaaatacaatagaggttgtcgtggcaacaattgcttttggaatgggaattgac
aagttaaatgtccgaagaatcattcattatggttggccacagagtttggaagcatattat
caagaagcaggtcgagcaggaagggatggaaagttagctgactgcattttatttgcaaat
ctaacaagagcaccatcacttttgccgagtcgaagaagcgaagagcagacaaagcaagca
tatagaatgttgtctgattgtttcaggtatggaatggcttcctcgtgctgtcgggctaaa
aagcttgtggagtactttggggaggatttcagtcatgacaagtgtctcttgtgtgatgtc
tgtgttaccggacctccagaaatgcagaatttcaggaaggaggcagatgtcttattgcaa
gttattgctgctcatgatagacagggcagatacaagaataatgatatcatcagtaatgat
attagacgtgagagctatacggggagactcaatctcagaatgattgtcagtaaaataaga
gagcagtctcagcagtttatggcaactcagctgctttggtggcaaggtcttctccggatt
atggaaggtaaagggtttgtcagagaggaagatgataagacacatgttcaattgaagttc
cccaagctaacagaacttggcctggagtttctactatccgaaaaggagaaaagtttctat
gttcaccctgaagcagatatgctgctctcggcaagcatgcccaaatctttctctactttc
tcagagtggggaaaaggctgggctgatcctgagattcgatgtcagcggttggagagtttt
caacacaacagaagcccacaaagctcctttggtaaaagaggaaaacgaaaatcacgaaag
caacgaacgagaaagtcaagtgctagtagtcaaagtgttagaactgttagaggtagaata
gaggctaaactctccaaacaaagtatcagaccaaggtcatag
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