Frieseomelitta varia: 122527660
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Entry
122527660 CDS
T09482
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122527660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122527660
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
122527660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_16
TPR_2
TPR_1
TPR_19
TPR_8
TPR_17
TPR_11
TPR_12
TPR_CcmH_CycH
ARM_TT21_C
TPR_6
ANAPC3
DUF7017
TPR_10
TPR_21
BTAD
PknG_TPR
TPR_15
Motif
Other DBs
NCBI-GeneID:
122527660
NCBI-ProteinID:
XP_043507965
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MSNEIKLALKEARETFKENNYIDVIKKCKKILKKDQNNYAALMLLAAAMKEIDEYKSQVP
LVLQRGIQIQADNPLAWHGLVAYYEKNLDNNDCYNQLLLAYCKLLQIESDSKFTYISNKL
LEFSFQLKDIETINQCIEHLSELRKNLDDNRVKMIDKALGCLLLDNFYNLDKYQNLLKCI
FKSVINDLDATKQRNFYKKYLKILYDKDELNNLINEAVNMHQQFPEDVLPLEYICRVYCE
QNILNKDFTDVDITKFYECLLKLNEESETAKIVKALHLIKSNNLTTAREILKDILTLKPS
SIYGWMALSEISRRLHCWEDAEVAAKRVLDINECKIKDKLLYKMELTLVEAMSRTNDKNK
WETAFQMCKDIRPSTQLDLIRARLNILLNQSDVHILLDNLELNLEIKTHASILRALYLKQ
NKQYEEAVNILDSVLEAQSSEAWLLLGIIYWEMAEYNYSLMAFLNGIKADRFNWKCLIYL
GHYYREHGNDMERSRKCYQTALQINPNSEEAGIGLSTAYRLLKNQDANIKLLQMLTVQGS
GPRWAWLQLGLQYLDQGNAEQAIKAFQHVIRADSSDSHCWESLADAYFIRGAYTSALKSY
QRALELCPKSLYPMIQLANIKLIIGQYKEAKKDFECILINESCYIPALKGLAEACLALAK
NCTAKQLLGRANDYLQQAMDNLTIAIKECKDTSCLWKLLGDVCYRVATLPEKYSHLKISS
ILFKHESVENIILLKRLDIFTLSIRCYCCAISLSPKSASLWHDLVLCYLMQLQHDPSVNH
KNLASKCLAAAKYAVKLCPSTWIHWNLLGVICMSPYIRNYALAQHAYIMAIDKELNNAIV
WCNLGTLYLYIGNFYKANEAYSRAQRADPAYINSWIGQASIAEMMQRKETMDLFRHAIQL
GYHNQAAVGYAHWILDAILNSSTRKNTLYFESVSITYSATNVMTLYVENRPNDCYARNAY
GLLLERQKLYKSAAEQFAVAVCNSTKNEKDLVSINLARVLIRLKKYNEAIKLCRTVTNVN
YNSQCHLALALFKAAQYEEAYVTYETTLHSFADTEIEKSYTLCAMAAIAYTFQRVDDAKT
LLFQCMQLQRPVITSLLAAASLGILHGDINLTTLVLNELKLYETHPKYGHHILNLFVYFY
LIGNDIKKAITILSKAIFKYPGNVKYWTQLLRILLETDLQLFSRCAQKVLFLNRNIITEN
HAHVACALSFSCFIQNTGPTSIRSMQKLLFTYPANIESWAMFIAAFLSRSTIKNCKVDIE
WLSAFITIVQQNYQSTSLMTKWLKDSKIKLRQLN
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaaataaaactagctctcaaagaagctcgagagacatttaaagaaaacaat
tatatagatgtaattaagaaatgtaaaaaaatattaaaaaaagatcaaaataattatgcc
gcacttatgttattggcggctgcaatgaaagaaattgatgaatataaatcacaagttcca
ttagttctccaaagaggtatacaaattcaagcagacaatccattagcttggcatggttta
gtagcctattatgaaaaaaatttggacaataatgattgttataatcaactattattagct
tactgtaaacttttacagatagaaagcgattctaaatttacatatatttcaaataaactc
ttagaattttcctttcaactgaaagatattgaaaccataaatcagtgtattgaacattta
agtgaattacgaaaaaatttggatgataacagagttaaaatgattgataaagctcttgga
tgtctattattagataatttttataatcttgataaatatcaaaatttattaaaatgtatc
ttcaaatctgtaatcaatgatcttgatgcaactaaacaacgaaatttttataagaaatat
ttaaaaatattatacgacaaagatgaattaaataatttaataaacgaagctgtgaacatg
catcagcagtttccagaagacgtgttacccttagaatatatatgtcgtgtttactgtgag
cagaatatcttgaataaagattttactgacgttgatataacaaaattttatgaatgtctt
ttaaaattgaacgaagaatctgaaactgctaaaattgttaaagcattacatttaataaaa
tcaaataatttgactacagcccgagaaatattaaaagatatacttacattgaaaccgtcc
tcgatatatggttggatggcattaagtgaaataagtaggagactccattgctgggaagat
gcagaagttgctgccaaacgagtattagatataaatgaatgtaaaataaaagataaatta
ttatacaaaatggaattaacgttagttgaagcaatgagtagaactaatgataaaaataaa
tgggaaactgcttttcagatgtgtaaagacatacgcccttcaacgcaattggatctgatt
cgcgcacgtctgaatatattgttaaatcagtcagatgtacatattcttttggacaattta
gaattaaatctcgaaattaaaacacatgctagtattcttcgagcattgtatttaaaacaa
aacaaacaatacgaggaagctgtgaatatactggattcagtcttggaggctcagtcttct
gaagcgtggttacttctcggtataatctattgggaaatggcagaatataattacagctta
atggcttttttaaatggaataaaagccgatcgttttaattggaagtgtctaatttacttg
ggacattattaccgtgaacatggtaacgatatggaacgttctagaaaatgttatcaaact
gcattacaaatcaacccaaattccgaagaagctggcattggtttaagtacagcatatagg
cttcttaaaaatcaagatgcaaatataaaattgttacaaatgctaacagtacaaggcagc
ggtcctagatgggcatggctacaactcggattacaatatcttgatcaaggaaatgcggag
caagctattaaagcattccaacatgttattagagctgattctagtgacagccactgttgg
gaatcattagcggatgcatattttatacgaggtgcatatacatcagcattaaaatcttat
caacgagcattagaattatgtccaaaatcattatatccaatgatacaattagcaaatata
aaattgattattggacagtataaagaagcaaagaaagattttgaatgtatattaataaat
gaatcatgctatatccctgctttaaaaggattggctgaagcttgtttagcactagcaaaa
aattgtactgccaaacaactattgggtcgtgctaatgactatttgcaacaagcaatggat
aatttaactatagccattaaagaatgtaaagatacatcttgtctttggaagttacttggt
gatgtgtgttacagagttgcaacactaccagaaaagtacagtcatttaaaaatatcatct
attttatttaaacatgagagtgttgaaaatattatattgcttaaacgattagacatattc
acattatcaataaggtgttactgctgtgcaatatctctttctccaaaatcagcttcatta
tggcatgatttggttttatgttatttaatgcaactacagcatgatccatcagtgaatcat
aaaaatcttgctagtaaatgtctagctgctgcaaaatatgctgttaaattatgtccttca
acatggatacattggaatcttttgggtgttatttgtatgtcgccatacataaggaattat
gcattagcacaacatgcttacatcatggcaattgataaggaattaaataatgctatagta
tggtgtaatttgggaacattgtatttatatataggaaatttttataaagcaaatgaggct
tattctcgagcacagcgtgcagatccagcctatataaatagttggataggacaagcctca
attgccgaaatgatgcaacgaaaagaaacaatggatttatttagacatgcaatacaatta
ggatatcataatcaagctgccgtagggtatgcccattggatacttgatgcgattttaaat
tctagtaccagaaagaatactttatatttcgaaagtgtttctatcacatattctgctact
aatgttatgacgttgtatgtagagaatcgtccaaatgattgttacgctcgaaatgcatat
ggattattgttagaaagacagaaactttataaatcagctgctgaacaatttgccgtcgcc
gtatgtaatagtactaaaaacgaaaaagatttagtttctataaatttagcacgtgtactg
atacgactcaaaaaatataacgaagcaataaaattatgtcggacggttacaaatgtcaat
tataattctcaatgccatttagcgttagctttattcaaagctgcgcagtatgaagaagca
tacgttacatatgaaacaactctgcattcttttgcggatactgaaatagaaaaatcgtat
acattgtgtgcaatggcggcaatagcatatacttttcaaagggtagatgatgcaaaaact
ttgcttttccaatgcatgcaattacaacgtccagttataacaagtcttttggcagctgca
tcgttaggaatattacatggagatattaatttaactacattggtattaaacgaattaaag
ttatatgaaactcatcctaaatatggtcatcacattctaaatctatttgtatacttttat
ttaattggaaatgatattaaaaaggccattactatactctctaaagcaatttttaagtac
cctggtaatgtgaaatactggacacaattacttagaatattattggaaactgatttacag
ctatttagcagatgtgctcaaaaagtactgttcctcaataggaatattattactgaaaat
cacgcacatgttgcatgtgctttgtctttcagttgtttcatacaaaatacaggaccaaca
agtattagatctatgcaaaaacttttattcacttatcctgctaacattgaaagctgggca
atgttcattgcagcatttttgtcaagatctactattaaaaattgtaaagttgacatcgag
tggctttcagcatttataactattgtacaacaaaattatcagtctacaagtttgatgaca
aaatggttgaaggacagtaaaataaaattaagacagttaaattaa
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integrated database retrieval system
