Frieseomelitta varia: 122536311
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Entry
122536311 CDS
T09482
Name
(RefSeq) collagen alpha-3(IX) chain-like isoform X1
KO
K08131
collagen type IX alpha
Organism
fvi
Frieseomelitta varia
Pathway
fvi04512
ECM-receptor interaction
fvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122536311
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122536311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
fvi00535
]
122536311
Proteoglycans [BR:
fvi00535
]
Extracellular matrix (ECM) proteoglycans
Others
122536311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
122536311
NCBI-ProteinID:
XP_043524514
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MERGKPRGSPELISSCRAVVQCVASPYSLFVPSILRVIHIERFTGYTGWPILIYKSTIGS
RQRFCIQPKTSGTSRFNATGRSFFRTSRIDLALRMYFSIWIFVLVQFIQYTSGEETILDS
PRGPCEGPLGEDDLQTFDFISKLKLDLLEAQYTGVTRVRGSNRMQTAYRLEKDADVTLPT
KIILPNGLPEEFSAVCTFRARKLPKYAWHIIRIVDMENEPQFLIAMNPKTQTLDLSMKNQ
TRRLETASFTADRIFDKNWHKINIGIFKNKLVVYIDCDYVGTQDLNPRGPIKADGEVSIS
KISHSKHTVPIDIQWMVLNCDPTRPETETCEELPKSLSSSLLPQRRPSCEIICPQGPPGT
NGTNGLPGLAGLPGPPGPIGEPGLPGRQGLRGPPGEQGKSGPQGFTGARGFPGNPGPKGP
TGPIGLSGAKGENGERGDMGFPGLKGDQGLPGPRGYPGPPGPPGNISDYRNIIPRFVGPP
GSPGFPGQKGEQGEHSNKGEQGQKGEPGEKGNPGQDGSPGSEGKPGLDGFPGLKGEIGFP
GAPGPQGLPGLRGETGAPGLPGIQGPKGDAGEPGRDGSIVGSIVPGPAGPEGPPGTPGED
GLPGIKGEPGPVGPPGLPGLQGKNGPPGSPGPPGLQGSPGLSGEVGAPGPRGIEGAVGKS
GPPGFSGRPGEKGDRGQQGEQGPVGPRGLPGSPGTPGLPGAAGIPGLDGRPGPPGPPGFP
GPPGMVSDMLSTNNVLETIGSPGVSGPRGVPGTPGLPGERGPPGERGPQGQIGLPGMPGK
DGAPGLQGPPGVRGQTGMPGVQGPPGQSITESEIRDICASVLREQITEMAAQMQGPPGPP
GRGRPGRLGSPGPQGRPERLKELTEGLRGQPGLPGLARQGRPGRTGTQGIPGDPGPPGLP
GERGFVGLPGPQGPIGPQGPSGERGEKGDKGQEGVGIEGPMGPRGLPGPPGNDGIGLPGR
QGERGESGKPGIPGMRGPAGPQGLPGFCELCNYPSANYLQYSRGNEKGP
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggcaagccacgcggttctccagagcttatcagttcgtgtcgggcagtcgtg
caatgcgttgcttcgccttatagtttatttgtgccatcaatattacgtgtgatacacatt
gaacgcttcacgggatatacagggtggcctattttaatctataaatcaactatcggaagc
cgccagcgcttttgcatccagccgaaaacttcgggtacgtcgcgtttcaacgcgaccgga
agaagcttcttcagaacaagccggatcgatttggccttgcgaatgtacttctcaatatgg
atattcgtattagtgcaatttatacaatacacatctggcgaggaaacaattctagattca
cctcgtggaccatgcgagggtccactgggtgaggacgatcttcaaacattcgacttcatc
agcaagctgaaattagatcttttagaggcgcagtacactggcgtaacgcgtgtcagaggt
agcaatcgcatgcaaaccgcctacagattggaaaaggatgcagacgtcaccctgccaacc
aagattatacttccaaacggtttgccagaggaattcagcgcagtctgcacgttcagagcc
agaaaactgccaaagtatgcttggcacattatcagaatcgtcgacatggaaaacgagccc
cagtttttaatcgcaatgaacccaaaaactcagactttggatttgtccatgaagaaccag
acaaggagactagaaacggcgtcgttcaccgccgatcgtatcttcgataaaaattggcac
aaaattaatatcggaatcttcaagaataagctggtagtatacattgattgcgactacgtt
ggcacgcaagatctgaatccacgaggacctatcaaagcggatggcgaagtctcaatatcg
aagatatcgcacagcaaacatactgtaccgatcgatattcagtggatggtcttaaattgc
gatcctacgaggccagagacagagacctgtgaggaactaccgaagagccttagcagctcc
ttattacctcagagaagacctagctgcgaaattatatgtccacagggacctccgggaact
aatggcactaatggtttacctggcttagctggtttacctggaccacctggaccaatcgga
gaacccggattacctgggagacagggtttacgcggaccacctggagaacaaggcaaatca
ggaccacaaggatttaccggtgcacggggatttcctggaaatcctggtcccaaaggaccc
actggaccaattggtctatctggagcaaagggagaaaacggtgaaagaggagacatggga
tttccgggattgaaaggagaccaaggtttaccaggaccacgtggttatccaggtcctcca
ggtccaccaggaaatattagtgactatcgtaacatcataccacgatttgtagggccacca
ggttctccaggatttccgggtcaaaaaggagagcaaggggaacacagcaacaaaggggaa
caaggtcaaaaaggtgaaccaggagaaaaaggtaatccaggacaagatgggtctcctgga
tcagaaggaaagccaggccttgatggttttcctggactcaaaggagaaataggatttcca
ggagcaccaggtcctcagggattaccaggtcttcgtggtgaaactggagcacccggttta
cccggaattcaaggtccaaaaggagatgctggagaacctggccgcgatggttcaatagtc
ggatccattgtaccaggaccagctggtcctgaaggccctcctggtacaccaggagaagat
ggtttaccaggaataaaaggagaacctggtcctgttggcccaccaggtcttcctggattg
caaggaaagaacggtcctcctggttctccgggacctccaggattgcaaggttcacccggt
ttatctggagaagtaggtgccccaggtcctcgaggaatcgaaggtgctgttggaaaatca
ggaccaccaggattcagtggacgacctggggaaaaaggtgatagaggtcagcaaggagaa
caaggtcccgttggaccacgtggtttacctggaagtcccggtacaccaggtttacctgga
gccgctggtattccagggttagatggacgaccaggtccacctggccctccaggttttcct
gggccaccaggaatggtttcagacatgttaagtacaaataatgtgttggaaactatcggc
agtccaggcgttagtggaccaagaggtgtgccaggtactccaggattaccaggtgagaga
ggacctcctggagaacgaggtccacaaggtcaaataggactaccaggaatgccagggaaa
gatggagcgccggggcttcaaggaccaccaggtgtcagaggacaaacaggaatgccagga
gtccaaggaccaccaggccaaagtatcaccgaatcagaaattcgagatatatgtgccagt
gtgttaagagagcagataactgagatggcagcacagatgcaaggcccacctggtccacct
ggtcgaggccgtccaggtcgtcttggatcacctggtccacaaggtcgcccagagaggctg
aaagaactaacagaaggtcttcgagggcaacccgggttgccgggattggcccgacagggt
cgtcccggtcgaaccggaacccagggcatcccaggtgatccaggtcctccaggtttacct
ggggaacgtggatttgttggattaccaggaccacaaggccccataggtcctcaaggtcca
tctggtgaacgaggtgagaaaggtgataaaggccaggaaggtgttggtatagaaggtcca
atgggtccacggggattgcctggtccacctggtaatgatggcattggattgcctggaaga
caaggagaacggggggaatcaggcaaaccaggaatccctgggatgagaggaccagctgga
cctcagggattacctggattttgcgagttgtgcaattatccaagcgccaactacttacag
tattctcgcggtaatgaaaaagggccctaa
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