Fusarium venenatum: FVRRES_09950
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Entry
FVRRES_09950 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
fvn
Fusarium venenatum
Pathway
fvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVRRES_09950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvn03019
]
FVRRES_09950
Messenger RNA biogenesis [BR:
fvn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
FVRRES_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_2
TPR_22
TPR_1
TPR_8
TPR_14
TPR_CcmH_CycH
TPR_17
TPR_12
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
ANAPC3
ARM_TT21_N
ARM_TT21_C
TPR_Slam
TPR_10
ARM_TT21
TPR_4
HrpB1_HrpK
RPN6_N
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
37261588
NCBI-ProteinID:
XP_025593587
UniProt:
A0A2L2TND1
LinkDB
All DBs
Position
III:complement(5281482..5285817)
Genome browser
AA seq
1421 aa
AA seq
DB search
MSGTKAALKGINDAIRQQKFDDAVSKARDLLEKDPKNYQAHIFLAFALDKQDRLDQAQET
YRSATWLRPQEAQAWQGLIKLFEKQNNKKLADYHQAVVNLAQIYQDVDDMYKAQDVVIKF
IDFARVKGDDIQYAEALSIQLPESPLYPILEGRFPHPAKTYETVALILEKYEKHRINTLI
GERRTKLGAKLSEVTLDAKREVYSQSKLENIYRQLINWTNDDDLRRQYEEKLLQLCYDRL
LVAPSGAEKDTERQKVLDLANGMVAIKYPYKLAWDISIEWQDKKEVREWDVDVLRAYCSF
FPDSDLYKVITSYLTSPISPFPPEKAQEKAKAAPSDSEESSDDDDGGVPTLVVPLTDEDR
LIMITEGISTADSVLAYRLTGQYLLHIGEYESTVELMRKGMTLLAQERKKTGLSFVNAED
SYYLSLGTALVYYQSPRHHKEAKELFDKVLERDTTSTSALIGVGLIYEEEEEYDEAIDYL
TRALQRDQTNMKVKSEAAWVKALKGDWQTAKDELQGCLEPLEKQGTTSKELLGETQHRLG
VCIWNIDTSKAARKQRKGESAYAYWLSALNNHLNHAPTYTYLGAYYGDYAKDKGRSRRCF
QKALELSHAEVVAAERLARSFADDGDWDRVELVARRVVDSGKVKPPPGSKRKGISWPFAA
LGVAELNKQDFHKAIVSFQAALRISPEDYHSWVGLGESYHSSGRHVAATKAILNAQKLEE
DTEADISGDTWFTKYMLANIKRELGEYDESVALYRSVIETHPEEEGVIIALLQTTVDSAL
TSVEKGLFGKAVQLATETIEYAKTTSGSAFETFNFWKAIADACSVFSSVQSRTKDFPSDS
IRGILEKGSQEAYEIFASIDKVGTNVVFAQGLYADDEKPGVDLTRCIHATILCHKQGVHI
ASNDRHAQSVAYYNLGWAEYRAHICLPPEIRKKSSSYIKAAVRSFKRAIELEAGNSEFWN
ALGVVTSEINPSVSQHAFSRSLYLNERSPAAWTNLGTLALLAGDVKLANEIFTRAQSTDP
DYAHAWLGQGFVALLHGETKEARGLFTHAMEIADASSLPTRRHYSSSLFDHILAVSPNDV
NIESLIQPLFALNQHQSLKSQDLAFTHMATLFQERTNESSRAVETLEKISLTIEADYEST
ESPQSLAKFALAKTDLARTYLASGSYEKAVECGELALGLSSDDAENELSSEQRKKARLSA
HLTVGLAEYYQNRFDEAIKYFESALEESDGNPDAVCLLAQVLWAQGSEESRDRAREELFA
VIEKQPEHVQSILLLGVIALLDNDEDSLEAVVEELHGLRTNHKVTASEQSAIGEVLRAIA
TLGEGRTEEDIRTQIQTDIILYPNLPHGWAAMAQSAGDEHAAQMALKVASRGIPPKGLLD
AQDLSKAYAGTATAGDAQRAAFLAPWEQSGWTSLSAATESV
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggacaaaagctgccctcaagggcatcaatgacgctattcgccagcaaaagttc
gatgatgctgtgagcaaagcacgggaccttctggaaaaagaccccaagaactaccaagct
cacatcttcctggcatttgctctggataaacaagacagactcgatcaagcacaggagact
tatcggtctgcgacatggcttcggccccaagaagcacaagcttggcagggtctgattaag
ctgtttgagaagcaaaacaacaagaagcttgcagattatcaccaagctgtagtcaatctg
gcccagatttaccaagatgttgacgacatgtacaaggcccaggacgtggtgatcaagttt
atcgattttgctagagtaaagggagacgacattcaatacgccgaggcactttccatacaa
cttcctgaaagtccactgtatcctatcctcgagggccgcttcccccaccctgctaaaacg
tatgagaccgtcgcgctcatcctcgagaagtacgagaagcaccggataaacactctcatc
ggagagcgacgaaccaaactaggtgccaagctttctgaagtcactctcgatgccaagcgt
gaagtttacagccagagcaaactggaaaacatttaccgacagctgatcaactggacaaac
gatgacgatctaagaagacagtacgaggagaagctcctgcagctttgttatgaccgtctt
ctggttgcaccatcaggcgctgaaaaggatacagagcgccaaaaggtacttgatctggcc
aacggcatggttgccatcaaatatccctacaagctcgcttgggatatctctatagagtgg
caggacaagaaagaggttcgagaatgggatgtcgacgtccttcgagcttattgctccttc
tttcctgatagcgacctctacaaggtcatcacaagctatctgaccagccccatctcgcct
ttccctcccgagaaagcccaagagaaggccaaagcagcccccagtgactcagaggaaagc
tccgacgacgacgacggtggcgttcccactcttgtggtacctctgactgacgaggatcgt
cttatcatgataaccgaaggcattagtaccgcagattcagttcttgcatacagacttaca
ggccaatacctccttcatattggagagtatgaatcgaccgtcgaacttatgcgcaaggga
atgactctgttggcgcaggagcgcaagaagacaggtctttcgttcgtcaatgcagaagac
tcctactacctttcactcggaacagctctggtgtattaccaatcacctcgacatcataaa
gaagctaaggaattgttcgacaaggttctcgagcgcgacaccacttctacttctgcttta
atcggagttggccttatttatgaagaagaggaggaatatgatgaggccattgactatctc
acccgagctttgcaacgtgaccagactaacatgaaagtcaagtccgaagctgcttgggtc
aaggcgctcaaaggagattggcaaaccgcaaaagacgagctccagggatgtcttgaaccc
ctggaaaagcaaggaactacttcaaaggagttgctgggtgagactcaacatcgccttggc
gtgtgtatctggaacatcgacactagcaaggccgcacgaaagcagcgaaagggagaatcc
gcatacgcatactggttgagcgctttaaacaaccatctaaaccacgcacctacctacaca
taccttggagcatactacggtgattacgcgaaggacaaaggtcgctcgaggcgttgtttc
cagaaagcgctggagctttctcacgctgaagtggttgcagctgagagacttgctcggtcg
ttcgcggatgacggggactgggatagagtcgagctcgttgcccgccgtgtcgttgactcg
ggtaaagtgaagccaccaccaggatcaaagagaaagggaatcagctggcctttcgctgca
ctgggtgttgcagaactaaacaaacaagactttcacaaggccatagtgtcgttccaagcc
gcgcttcgcatcagtcccgaggattaccactcctgggttggccttggagagagttaccac
agctctggccgacatgttgccgctacgaaggcgattctaaatgcccaaaagcttgaggaa
gataccgaagctgatatctctggagatacttggttcaccaagtacatgctcgccaacatc
aagcgtgaactgggtgagtacgacgagtctgtcgctctctacagatcagtcatcgaaaca
catcccgaggaagagggtgtcatcattgctctgcttcagacaacagtcgacagcgcactt
acttccgttgagaagggcttgttcggaaaggcggtgcagcttgctactgagaccatcgag
tatgcaaagacaaccagtggcagcgctttcgagacttttaacttctggaaggccatagct
gatgcgtgctctgtcttttcatctgtccaaagccgcacaaaagacttcccttctgattcc
attcgaggtattttagagaagggctcacaggaagcctatgaaatcttcgccagtatcgat
aaagtcggcactaatgtcgttttcgctcaggggctatacgcagatgatgagaagcccggt
gtagacctcacccgatgcatccatgctacaattctttgtcataagcagggagttcacatt
gcgtctaacgaccgccatgcccagtctgttgcctactacaacctaggatgggcagagtac
cgcgcccatatttgtctcccacccgaaatcagaaagaagtctagcagctacatcaaggct
gcggtgcgatcgtttaagcgtgcgatcgagttggaggcaggaaactctgaattctggaat
gctcttggtgtggtaaccagcgagataaacccttcagtctctcagcatgcattttctcga
agcttgtatctcaacgaacgaagtcctgcggcctggaccaacttgggaacgctcgctttg
ttagcaggagatgttaagttagccaacgagatctttacgagagctcaatcaactgacccc
gactatgcgcatgcttggctgggacaaggctttgtggccttgttgcatggcgaaactaag
gaagctcgtggactcttcactcacgcaatggagattgcagatgcatcttcattacctact
agacgtcactactcgagttctttgtttgatcacattctcgcagtttctcccaacgatgtc
aatatagagtctcttatccaaccactcttcgctcttaaccaacaccaaagcctcaagtca
caagatttggccttcacgcatatggcaacactgttccaagaacgcacaaatgagagtagc
cgtgctgttgagacacttgagaagatttctttaaccattgaggctgactacgagagcacc
gaatctcctcagagccttgctaagtttgcgttggccaagaccgatttggcacgaacttac
cttgcatccggctcttatgagaaggcggttgagtgtggtgagctagctttgggactgagt
agcgacgatgccgagaacgagctttcaagcgagcaacgcaagaaggcacgattatctgcc
catcttactgtcggattggccgagtactaccagaaccgttttgatgaagccattaaatat
ttcgaatccgcattggaggaatctgatggtaacccagatgccgtttgcttgttggcccaa
gtactctgggcccaaggatcagaagaatcgcgagacagagctcgtgaagagctgttcgcg
gtaatcgaaaagcagcccgagcacgttcaatcaattcttcttcttggtgtgattgctttg
ttggataacgatgaggatagcttggaggcggttgttgaagagctacacggacttcgtacc
aaccacaaagtcacagcatcagagcagtccgccattggagaagtactacgagctatcgca
actcttggtgagggacgcacggaagaggatataagaacgcagatacagacagatatcata
ctataccccaacttgcctcatggttgggctgctatggcccaatctgcaggtgatgagcat
gctgctcagatggcactcaaggtagcatcaagaggtattcccccgaagggcctcttggat
gctcaggatctttcaaaggcgtatgcaggaacagcaacagctggcgacgctcaacgagcg
gcattcctcgctccttgggaacagagtggttggacatcactttctgctgccactgagagt
gtttga
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