Fusarium verticillioides: FVEG_02144
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Entry
FVEG_02144 CDS
T04869
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
fvr
Fusarium verticillioides
Pathway
fvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVEG_02144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_02144
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FVEG_02144
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FVEG_02144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_HEAT
CNOT1_TTP_bind
Motif
Other DBs
NCBI-GeneID:
30060380
NCBI-ProteinID:
XP_018745438
UniProt:
W7M2W1
LinkDB
All DBs
Position
6:2013894..2021626
Genome browser
AA seq
2189 aa
AA seq
DB search
MVPPPRAGSFSPNPAQILQTGASHSPHPSQAAILSAGASPSASSPTGTNSLTKIVVAQVY
LLLSTIKEDKDRAKWELQVDQLNKLIDEHGMEVFTKYFTRLVAGNAPQIFPGLNRPGTGP
NNYHILVAEMQKISHDPNQASKIAESIESATEDIFRDFDLSTFMEHFKLDALEKTILALA
FKLTSRADLKTKADAILSTNFPSFIDILSRFDLDAHADLTPSFIALILDRFLQYHPPSFN
ASSMRELETRVISRWMDQSPERTPPSEILAALDLSRVLADRPFNGLVRYIQKTGLDFTRD
EETCVSYLQNRPSGLQLGPEQVSAAMTFTAISQSPQQDTGVLVAALRRVLPKSFDWMEVI
ILFDQPSTRVSSQQFLRLYQALLPIAQDSKSGLIVDIQRLWGGVWRNPEAQLSFVSAYAS
LTPDQLDATTIPGLQRSITIEEYANSPENVQERAIVAVKHPLISVAALSSIFNVALSSMM
ASTSIEAKRLFQEVVVPNLDIFLVSAFEVPRQHWAPMAVETLSSLFENFLYKRSPQYDFV
LDSVWRKDKNWVIQRLVDTHAVKPMDLPVILEHAVKHNWLDTLVYQSNGFGVDLAALAHA
EGYLDLSKWALFNAERSEEMYNTLLQFLMIKANLESQFQRGTSDDSSVKNTTTLQVRTVS
ALLRILEDFSPSPPRPELILVQRACIIAYPRLINYGEGYDDVIDANGRDGNLLSPTANTR
MEEHYKKMYSDEVQVRNIVEVLDRYKHSRDPLDQDVFACMIHGLFDEYSHYADYPLEALA
TTAVLFGGIISHKLVSNLPLQIGLGMILEAVKDHSPEEPMYKFGLQALMQLFIRFREWPA
FCRQLCQIPGLHNTEVYKKAEEVVREHDEELARGRNGAGTPHGLGFQGDGFPNGNSDELA
NVERQAPAFAALNVDPPAMDVEFEDPDEGAQDKVQFVLNNITEGTLQAMCQELRETMERR
HQQWFASHLVEERAKMQPNYHHVYLELVKLFEDKALWSEVLRETYISVCRMLNSEATMQN
STERTHLKNLGGWLGLLTLARDRPIKHKNIAFKQLLIEAHDTKRLIVVIPFVCKVLTQGA
TSAVFRPPNPWLMDIIHLLIELYHHAELKLNLKFEIEVLCKGLNLDHRSIEPSGEILNRP
VIEEPAETLAPEQLDAFENLSLNGIGSGVGAGLSPQALAPTIPDLGPLITIPPTNEMVVS
TTRLHEIVRTALSRALQDIIQPVVDRSVTIAAISTQQMIHKDFAIEPDENRVRNSAISMV
KATAGSLALVTSKEPLRANFTNYMRNLSTDLSQGLPEGTIIMCVNSNLDLACNIIEKQAE
ERAVPEIEEMIEPELEARRRHRLQRPNDPYFDSSLSRWAMAIPNPFKLSPNVNGLNPEQM
AIYEDFARQPRSATLPTPSHGPSASDATRSLANEVLQDQFSSIPSIPTPAETPSIQQHLG
AQMQPYAPPHTTANAMTNGRSPGFQMDVRNLAERVNKLLQELMRVATESPHEHFLDLPRP
SPLVDVVDALVQHIIKTSQSHEDFSIYAAEQIIQLIFSQVDDNLALESLVHVLETLRKIA
GPVLNSRVRTLFSQQPGSTFLSLPLLAALVRTDLLDWRNIDLAMSKALQARKEGSLDFLE
HLLDLTLLDSRPIALYADFALTLDAAWSWISDDPDSAPGQRIKSKLTNSGLTRPTHADSQ
ALQHEQIEYVFDEWIHLCRNHNASEKAVTVFVQQLHAKGVMQNRDDLFVFIRVTIDLSIE
RFDYIVHSGSLADAYVMVDALAKLIATFIGMGFEPTSTRPAFIDSVLSLIELILVNHHVK
RGEQLSQRVFFRLLSMLFYEIQGISESLAEDERREILLRIARRLFKINPLYVPGFVYGWM
SLVQHRAFMPAILQLPNGVGWGPFSDLLCQLLDTLGDQLKVFEVSNVAKDIYRACFKLLV
ILQHDFPEFVVANHAKLCSSIPPHCTQLINAVLAANPQQSPRFNELGGKIQFDDMRLFAG
LMNEASVTLQSRSLLKVLDQALQSGPNEDIVANITHAMTHDTPKASTYGHVPVVANTSVI
DAVVLYIGHRAVEKATQTGTDLSLTGDENEVSLLSLIIHELPAEARYYILVSLVNQLRYP
SAHTAFFSQALLSIFAKDLGDPEEDEFREDITRVLLERLVSFWPQPWGLLYTVVELVKNE
DKYGFFKLPFIDDESHEVAKKFADVLQRA
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atggtcccaccacctcgagcgggatcattttcgcccaatcctgcgcagatactccagacg
ggtgcgagccattctcctcacccatcgcaggccgccattctcagtgctggcgcaagccca
agcgccagcagtccaacgggcactaattccctgaccaagatcgtcgtggcacaggtctat
cttctactcagtactatcaaggaggacaaggaccgtgctaagtgggagctgcaggttgac
caattgaacaagctcatcgatgaacacggaatggaagtgtttactaagtacttcacccgg
ctcgttgccggcaatgcgccccagatattccctggcctcaacaggcccggcacaggcccc
aacaactatcacattcttgttgccgagatgcagaagatttcgcacgatcccaaccaagca
agtaagattgctgaatcgattgagagtgccacagaggatatcttccgcgactttgatctt
tctacctttatggaacatttcaagctcgatgcattagagaagaccatattagctctagcc
tttaagctcacttctcgagcagatttaaagacgaaagccgacgctatattatctactaac
ttcccttccttcatcgatatcctttctcgatttgacctcgacgcccatgccgatctaacc
ccatcgtttatcgccctgattctggaccggtttctccaatatcatcctccgagcttcaat
gcttcttctatgcgcgaattggaaacacgtgtcatcagccgatggatggaccagtctccc
gagcgtacaccgccttccgaaatcctcgcggctctcgatctcagtcgagtgctcgctgat
aggcctttcaatgggctagttcgatatatccaaaagacgggcctcgatttcaccagagac
gaggaaacatgtgtctcttatttacagaaccgtcccagtggcttgcagttgggccccgaa
caagtttcagctgcgatgaccttcactgccattagtcaaagcccacagcaagatactggt
gttctggttgctgctctcaggagagtcctaccgaagtcattcgactggatggaggtaatc
attctgttcgaccaaccatcgactcgcgtctcttctcagcagttccttcgactttaccaa
gctctcttgccaattgcacaggactccaagtctggcttgatagtggatattcagaggtta
tggggcggcgtttggaggaatccagaggctcagctctcttttgttagtgcctatgcctct
ttaactcctgatcagcttgacgcgacgacgattcccgggctccagcgcagcattactatt
gaggaatacgcaaactcgcctgagaatgtacaagagcgagcaattgtcgccgtcaagcat
ccgttaatatccgttgctgctctctcctcgatcttcaatgttgcgcttagttccatgatg
gcgtcgacgagtatcgaggccaagaggctcttccaagaagtggtagttccgaatctggac
atcttcctggtctccgcattcgaagtacctcggcagcattgggcccccatggccgtcgaa
acactcagttctttgttcgaaaattttctttataagcgttcgccccaatacgactttgtt
ctggatagtgtctggaggaaagacaagaactgggtcattcagcgcttggtagacactcat
gctgttaagccgatggacctcccggttattcttgagcacgctgtaaagcataactggctt
gacaccctggtgtaccagtcaaatggatttggagtcgatttagccgctctggcccatgct
gaaggatacttggacttgtccaagtgggcactgttcaatgctgagcggagtgaagagatg
tataatactctgcttcagtttttgatgataaaggccaacttggagagccagtttcagcga
ggaacttctgatgactcttctgttaagaacacaacgaccctccaagttcgtaccgtatca
gcgttactgcgaatccttgaagacttttcgcccagtcctcctaggccagaattgatcctg
gttcagcgcgcttgcattattgcctacccccgactgatcaactacggtgagggttacgac
gatgttatcgacgccaatggaagggatgggaacctcctgtctccgaccgccaacaccagg
atggaggagcactacaagaagatgtatagtgatgaggtacaggttcgcaatatagttgag
gtcttagaccgctataagcattccagggatcctctggatcaggacgttttcgcatgcatg
atccacgggctctttgatgagtattctcactatgccgactatcctctggaagctctggca
acaaccgcagttctattcggtggtatcatttcgcataagctcgtttcaaacttgcccctt
caaattggattaggcatgattttggaggctgttaaggaccattctcctgaagaacctatg
tacaagtttggccttcaggcactgatgcagttgttcattcgcttccgagaatggcctgcc
ttctgcaggcagctctgtcagatacctggactccacaacacggaagtttacaaaaaggcg
gaggaggttgttcgtgaacatgacgaagagttggcccgtgggcgtaacggcgccggaaca
cctcatggactagggtttcaaggcgatggtttccctaatggaaactcggatgaactggcc
aatgtcgagcgtcaagcgcctgcgtttgctgctctgaatgtcgatccgccagctatggac
gttgagttcgaagatcctgacgagggcgcccaggacaaggtccagttcgttctcaacaat
atcaccgaaggcacactacaggccatgtgtcaagaacttcgagagaccatggagcgccgg
catcaacaatggtttgctagccatcttgttgaggagcgcgccaagatgcagccaaactac
catcatgtttatctcgaactggtcaagctgtttgaagacaaggctctctggagtgaggtc
ctgagagagacttacattagcgtgtgccgaatgctgaactcggaggcgaccatgcagaac
tcaacggaaaggactcacctcaaaaatctcggaggctggctaggtcttttgactctggca
cgagatcgtcctatcaaacacaagaacatcgccttcaagcagcttttgattgaggctcac
gatacgaagcgactcatcgttgttatcccgttcgtatgcaaagttctgactcaaggcgcc
acatcagccgttttcaggcccccgaatccatggcttatggatatcatccatttgctaatt
gagctttatcatcatgccgagctaaaactcaatctcaagtttgagattgaggtcttgtgc
aaaggtttaaaccttgaccacaggagtatcgaaccttcgggcgaaattctgaaccgacct
gtcattgaagagccggcggagaccctagcccctgaacaactagatgcgtttgaaaatcta
tcgctcaatggcatcgggtccggtgtgggtgctggactctcacctcaggctcttgcgcca
accattcctgaccttggtcccctgattactatccccccaactaatgagatggttgtcagc
actactcgtcttcatgagattgttcgtacggctctcagtcgtgctctgcaagatataatc
cagcctgtcgttgatcgctctgttactattgccgccatatctacacagcagatgatacac
aaggactttgctatagagcccgacgagaaccgtgtacgcaactctgctattagcatggtg
aaagccaccgccggtagccttgccctcgttacgtccaaagaaccccttcgcgccaacttc
actaactacatgcgaaacctctcgaccgatctctctcaaggactccccgagggcacaatt
attatgtgtgttaactcaaacctggacttagcctgcaatatcattgagaagcaggctgag
gaaagggctgtccccgaaattgaggagatgatcgaaccggagctcgaggctcgtcgacgg
catcgtcttcagagacctaacgatccttacttcgactcaagcctcagccgatgggccatg
gctattcctaatcctttcaagttatccccgaatgttaatggcctcaatcccgaacagatg
gctatttacgaagatttcgctaggcagccacgaagcgccacgcttcccacgccttcacat
ggcccgtcagcatccgatgctactagatccttggccaacgaggtgctccaggaccaattt
agttctatccctagtattccgactcctgcggagactccctcaattcagcaacatttgggt
gctcagatgcagccctatgcaccccctcataccactgctaatgcaatgactaacggtaga
tcacccggcttccagatggatgttcgtaatctagccgagcgggtcaacaagctactccag
gaactcatgagggtagccaccgagtctccccatgaacacttcctggatctaccgcgacca
tctcctcttgtggacgttgtcgatgcactcgtccagcacatcatcaagacttcgcagagc
catgaagatttctccatttatgctgcggaacaaatcattcagctcattttctcgcaggtt
gacgacaacctggctctcgagagcttagttcatgttttggagacgcttaggaagatcgct
ggccctgtcctcaacagccgcgttagaactctcttcagccagcagcctggctccaccttc
ttgagtttacctctgctcgcggccttagttcgaacggaccttttggattggaggaatatt
gatctggccatgtcgaaagcactgcaggcacgcaaagagggatctcttgactttttggag
cacctgctcgacctcacgctgctcgactcccgtccgattgctttgtatgccgactttgcc
ctgacgctggacgcagcttggtcatggatctcggatgaccccgattctgcccctgggcaa
cgcatcaagtcaaagctcaccaactctggtctgacacggccgactcacgctgacagtcag
gctctccaacacgaacagatagaatatgttttcgacgaatggatccatctttgccgcaac
cacaatgcttctgagaaggctgtcacggtgttcgtgcagcagctgcacgccaaaggggtt
atgcagaacagggatgacctctttgtcttcatccgtgtcaccatcgacctgtcgattgag
cgcttcgactacattgtccacagtggttcccttgccgatgcctatgtcatggtagatgcc
cttgctaagctcattgcaacgttcatcggtatgggctttgagccaacatctactcgtccc
gcatttatcgactcagtgctttcacttattgagctcattcttgtcaaccaccatgttaag
cgcggagagcagctgagccagcgcgttttcttcagattactgtcaatgctcttttacgaa
attcaggggatttcagagagcctggctgaggatgagcgtcgtgaaattcttctgaggatc
gctcggcgactgttcaaaatcaaccccttatatgttcccggcttcgtttacggctggatg
tctctcgttcagcaccgtgctttcatgccagcaattctacagctgcccaacggtgttggc
tggggccccttttccgacctgctttgccagttgctggacactctcggtgatcagttgaag
gttttcgaggtatccaacgttgccaaagacatttaccgggcttgcttcaagctgctcgtc
attctacagcacgacttccccgaatttgtcgtggccaatcacgccaagctttgctcgagc
attccacctcattgcacgcagctcattaacgctgtactggctgcaaatccccagcagagc
cctagatttaacgagcttggtggtaagatccagttcgacgatatgcgcctctttgccggt
cttatgaatgaggccagcgtgacacttcagtctcgcagtcttctcaaggtcctagaccaa
gcacttcagagtggaccaaatgaagatatcgttgccaacatcacccacgccatgacacat
gacactccaaaggcatctacttacggccatgtgcctgtcgtcgccaacaccagcgttatt
gacgctgtcgttctatatatcggacaccgtgctgtagagaaggcaacacaaactggcaca
gacctgtccctgactggtgacgagaatgaagtatcacttctttctctgatcattcatgaa
ctccctgccgaggccagatattatatccttgtcagcctagtcaaccaacttcgatatccc
agcgcccacactgctttcttcagccaggcgctcctttccatctttgccaaggatctcggc
gatccagaggaagatgaattccgcgaggacatcacccgagtgctgcttgagcgactggtt
agtttctggcctcaaccatggggtctgctgtacactgttgtggagcttgtgaagaatgaa
gacaagtatggattcttcaaacttcctttcatcgatgacgagagtcatgaggttgccaaa
aagtttgcagacgtgcttcaacgagcttag
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integrated database retrieval system
