Fusarium verticillioides: FVEG_04995
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Entry
FVEG_04995 CDS
T04869
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
fvr
Fusarium verticillioides
Pathway
fvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVEG_04995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_04995
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
FVEG_04995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_22
TPR_2
TPR_1
TPR_8
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_11
TPR_7
ARM_TT21_N
ARM_TT21_5th
ARM_TT21_C
TPR_6
ANAPC3
PPTA
TPR_Slam
TPR_10
ARM_TT21
T7SS_EccA1_N
HrpB1_HrpK
ChAPs
TPR-S
RPN6_N
EST1_DNA_bind
TPR_COPA_B
DUF4192
Motif
Other DBs
NCBI-GeneID:
30063018
NCBI-ProteinID:
XP_018749770
UniProt:
W7M800
LinkDB
All DBs
Position
4:complement(1996451..2001245)
Genome browser
AA seq
1479 aa
AA seq
DB search
MYFGALSLDLSTSLDRILSLDEIQKTTTNISQSTKRAKGASTSFGGGTLQHNRNLAIMSG
TKAALKAINDAIRQQKFDDAVNKAKELLEKDPKNYQAHIFLAFALDKKDRLDLAQETYRS
ATWLRPQEAQAWQGLIKLFEKQSNKKLADYHQAVVNLGQIYRDADDMYKCQDVVDKFVDF
ARVQGDETQYAEALSIQLPESPLYPTLEGRFPHPAKTYETVAHILEKAEKHRINTLIGER
RTKLGAKLTEVTLDAKREVYSQSKLEHIYRQLINWTNDDDLRRQYEEKLLQLCYDRLLVA
PTGAEKNAERQKVLDLANGMVAIKYPYKLAWDISIEWQDKKEIREWDVDVLRAYCSFFPD
SDLYKVITSYLTSPISPFPPEKPQEKVKAALNESDESSDDDDGGVPTLVVPLTDEDRLIM
ITEGITTADSVLAYRLTGQYLLHIGEYENTVELMRKGLALLAQERKKTGLSFANAEDSYY
LSLGTALVYYQSPRHHKEAKELFDKVLERDNTSTSALIGVGLIYEEEEEYDEAIEYLTRA
LERDQTNIRVKSEAAWVKALKGDWQTAKEELQECLEPLEKQGTESKELLGETQHRVGVCL
WNIDTSKAARKQRKGESAYAYWLSALNNNLNYAPTYTYLGTYYADYAKDKSRSRRCFQKA
LELSHAEVLAAERLARSFADDGDWDRVELVARRVVDSGKVKPPPGSKRKGISWPFAALGV
AELNKQDFHKAIVSFQAALRISPEDYHSWVGLGESYHSSGRHIAATKAILNAQRLEEETE
ADISGDTWFTKYMLANIKRELGEYDESIALYRSVIETHPGEEGVIIALLQTIVDNALSSV
EKGLFGKAAQLATETIEYAKKTEGSVLETFNFWKAIADACSVFSSVQSRTRDLPCESISE
LLKKGSQDAYEIFASVDKVGTDVVFAKGFLYADDEQPGVDLTRCIHATILCHKQGVHISS
NDRHAQAVAYYNLGWAEHRAHICLPYEIRKKSSSYVKAAVRSFKRAIELEAGNSEFWNAL
GVVTSDINPTVAQHAFARSLYLNERSPAAWTNLGTLALLSGDVEMANEVFTRAQSTDPDY
AHAWLGQGFVALLHGDAKEARGLFTHAMEIADASSVPTRRHYSSSLFDHILSSPPNEITV
ESLIQPLFALNQYQNLKSDDLAFGHLMTLFQERTRESSRAVDALEKISLTVEADYESTES
PQSLAKFALAKTDLARAYLASGSYEKAVECGELALGLSSEEAENELSSEQRKRARLSAHL
TVGLAQYYNNQFDEAITYFESALEESDGNPDAVCLLAQVLWAQGAESSRERAREALFEVI
EKHPEHVQSVLLLGVVALLDNDEDSLEAVVEELNGLRTNHKVTASEQSHIGEVLRAMATL
GEGRTEEDMRTQVQTDIMLYPDLPHGWSALAQSTGDEYAAQMALKVAARGIPPKGLLEAQ
DLAKASAGTSTAGDAQRAAFLAPWEQSGWASLATATEGI
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgtactttggagcgttgtctttggatttgtcgacgtcactcgatcggattctttcgctg
gatgagatacaaaagaccaccacaaatattagtcaaagcaccaagagagcaaagggagct
tctacgagctttggtgggggtaccctccaacacaacagaaatctagccatcatgtcaggg
acaaaggcagccctcaaggccattaacgatgctattcgccaacaaaagtttgacgacgcg
gtgaacaaggcaaaggagctcctggagaaggatcccaagaactaccaagcgcacattttc
ctagcctttgccttggacaagaaggacaggcttgacctagctcaggagacttatcgatct
gcgacgtggcttcgtccccaggaggcacaggcatggcagggcttgatcaagctctttgag
aagcaaagcaacaagaagctggcagattaccaccaggcggtcgttaatctggggcagatt
tatcgagatgccgatgatatgtacaagtgtcaagatgttgtcgacaaatttgtcgacttt
gcaagagtccaaggtgatgagacccaatatgctgaagcactttccatccaactccccgaa
agccctctataccccaccctcgagggccggttcccacacccagcaaagacatatgagacg
gtagcgcacatcttagagaaagctgagaaacaccggataaacactctcatcggagagcga
cgaaccaaactgggcgcgaaactcaccgaggtcacccttgacgccaagcgggaagtttac
agccagagtaaacttgagcacatttatcgacaactcatcaactggacaaatgacgatgac
ttgagacgacagtatgaagaaaagcttctccagctctgttatgatcgtctcctggtcgcc
ccaacgggcgctgaaaagaacgctgaacgccagaaagtgctcgatcttgccaacggcatg
gttgccataaaatacccatacaagcttgcttgggatatatctatagaatggcaggacaag
aaggagatcagagaatgggacgtggatgtcctccgagcgtactgttcattctttcccgac
agtgatctttacaaagttatcacgagttacctgacaagcccaatctcaccgttcccacca
gagaagccacaggaaaaggtgaaggcagccctgaatgagtcagacgaaagttccgatgac
gacgatggcggagttccaacccttgtggttcctttgaccgacgaggatcgactcatcatg
atcacagaaggcattactacagctgattctgttcttgcgtaccgactcactgggcaatat
cttcttcacattggagagtatgagaatactgttgagcttatgcgcaagggtttggcacta
ttggcccaggagcgtaagaagacaggcctttcattcgcaaatgccgaagactcttattac
ctttcgctcggaacagcactagtctattaccagtctcccagacatcataaagaggcaaag
gagctgttcgacaaagttcttgagcgggataacacttccacttccgccttgatcggtgtt
ggtctgatttacgaggaagaagaggagtacgatgaagctatcgagtatcttactcgggct
ctggagcgtgatcaaacaaacatcagggtaaagtctgaggccgcttgggtcaaagcactc
aagggagattggcaaaccgcaaaggaagaactgcaagaatgcctcgaaccgctggaaaaa
caaggcactgaatcaaaggagttgctgggtgagacgcagcaccgcgtgggagtatgcctc
tggaacatcgataccagtaaggccgcacgaaaacaacgaaaaggagagtccgcatacgca
tactggcttagtgctctgaacaataacctgaattacgcacccacatacacgtacctagga
acatattatgccgactatgcgaaggataaaagcagatcacgacgctgcttccagaaagca
ttggaactgtctcacgccgaagtgcttgcagccgagagacttgcacgctcttttgcggac
gacggagactgggatagagtcgagctcgtcgcccgccgagttgttgactctggcaaggta
aagccgccgccaggatccaagaggaagggcattagctggccatttgctgcgctcggcgtg
gctgagctaaataagcaagacttccataaggctatcgtgtctttccaagcagcgctccgt
attagccctgaagattaccattcctgggtcggtcttggggagagctaccacagttccggt
cggcacattgctgccaccaaggctattctgaatgcacaaaggctggaagaagaaaccgaa
gcagatatttccggagacacctggtttaccaaatatatgcttgctaacatcaaacgtgaa
ctgggcgagtatgatgaatctatcgctctctacaggtccgtcattgagacgcatcctggg
gaggagggtgtcattatcgccttgcttcaaacaatagtcgacaacgccctttcatctgtc
gagaaaggattattcggaaaagcagcccagcttgcaaccgagaccattgagtatgcaaaa
aaaaccgaaggcagtgttctcgagacttttaacttctggaaagccatagctgatgcatgc
tctgtcttctcttctgttcagagtcgcacgcgtgatttgccttgcgaatccatcagtgaa
ctcctcaagaagggctcacaggacgcttatgagattttcgccagtgttgataaggttggc
actgatgtggtcttcgcaaagggcttcttgtatgcagatgatgagcagcctggggttgat
ctcacccgatgtatccacgctacgattttgtgccacaagcaaggtgttcacatttcgtct
aatgatcgtcacgcgcaagccgtggcttattataatttgggatgggcagaacatcgcgcg
catatttgcctgccgtatgagatcaggaagaagtccagcagttacgtcaaagctgcggtg
aggtcattcaagcgtgcgatcgagttagaagctgggaattcggagttttggaatgcactt
ggtgtagtgaccagcgatatcaaccctacagtagcacagcatgcttttgcccgaagtctg
tacctaaacgagagaagtcctgcagcctggacgaacttgggaactctcgcccttttgtcc
ggagatgtcgagatggctaacgaggtcttcacaagggcccagtcaaccgaccctgactat
gcacacgcttggctaggacagggatttgtggctcttcttcatggtgacgccaaagaagcc
cgaggactattcactcacgcaatggagattgcagatgcatcttcagtacctaccaggcgt
cactactcaagctccctctttgaccatattctttcatcgccccccaatgaaattacggtt
gaatcgctcattcagccactctttgctctcaaccaataccaaaacctcaaatccgatgac
ctggcatttggccacttgatgacactatttcaagagcgtaccagagagagcagccgtgct
gttgatgcgctggaaaagatctccttgaccgtcgaggccgactatgaaagcaccgaatcc
cctcaaagtcttgccaagtttgctctggccaaaacggacctagcacgagcatacctcgct
tctggctcatacgagaaggcagtcgagtgtggcgagctagcactaggcttgagcagcgag
gaggcagagaacgagctctcaagtgaacaacgcaagagagctcgcttgtctgcacatctc
actgtaggattggcgcagtactacaacaaccagtttgatgaagcgatcacgtatttcgag
tctgccctggaggagtctgatggcaaccccgatgctgtatgcttgttagctcaggtactt
tgggctcagggagccgagtcatctcgagagagagctcgtgaagcattgtttgaggtgatt
gaaaaacaccccgaacatgtgcagtcggttcttcttcttggtgtggtggctttgttggac
aatgacgaggattctttggaagcagttgtcgaagaacttaatggtcttcgcaccaatcac
aaggtaacagcctcagagcagtcgcatattggcgaagtactacgggccatggccacgctt
ggagaaggacgcacggaggaggatatgagaacacaagtacagacagatatcatgctctac
cctgacctccctcatggctggtctgctttggcccaatctacaggcgacgagtacgcggct
caaatggcactcaaggtcgcagcaaggggtattcctccaaaggggttgttggaagcccag
gatctagcaaaggcatctgctggaacgtctactgctggagatgctcagcgggcagctttc
ttggcgccttgggaacagagtggctgggcatcgctggccactgccactgaaggcatttaa
DBGET
integrated database retrieval system
