Fructilactobacillus vespulae: R4B61_01185
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Entry
R4B61_01185 CDS
T11124
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fvs Fructilactobacillus vespulae
Pathway
fvs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R4B61_01185 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvs03019
]
R4B61_01185 (rny)
Messenger RNA biogenesis [BR:
fvs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
R4B61_01185 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
Prominin
LapA_dom
DUF4407
Motif
Other DBs
NCBI-ProteinID:
XNW44933
LinkDB
All DBs
Position
complement(229862..231457)
Genome browser
AA seq
531 aa
AA seq
DB search
MPIIILVFGLSLLVSSIASYVLKNKKLNRELSAAQREAERIEADNENTVNHTVAEIEAQT
QQELAEFQAEAEQEIEEQDAENQARGQRLDFREKSLDSSAARLERFHQTIKKQQGDLTAT
QTKIDETKKQARDLVAQRAAVVYEKSGLTPEQTRQLVIQNTETKLKQDYDVTVRENHDDM
VWNAKKEANNLMIKALECGVQDVPRDHIDRNIIIPDEAIRNKITGRAEQWLRLVESLAGV
DLIFHPEYPEVLIINTNDPIRREITRETINELVASRQINAAVIENIVNEVQRRVMDNLRI
FGEETCNQLRLGWVHPDLMKLIGRLKYRTSYSQNVLQHSVEVAELCGAMALELGLNVRQA
KRAGLLHDIGKAIDREVNGTHVELGVRITEAFEESDVIINSIAASHGDTETDNLIAVLVK
VADSMSGARPGARSESVEEYINRLKGLERIANSHEGVKDSYAIQAGREVRIIVDPRMVTT
EQGEAITRDVCDQIEAELTYPGKIKVTTIRKLNVVQYVGGKPNLKKKKHAS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgccaattataattttagtatttggattatcgctgttagttagttcgattgctagttac
gttttaaagaataaaaagttgaatcgagaactttccgcagcgcaacgagaagctgaacga
attgaagcagataatgaaaatacggttaaccatacggtagcagagattgaagcacaaacg
caacaagagttagctgaatttcaagcagaagcagaacaagagattgaagaacaagatgct
gaaaaccaggcgcgaggtcaacgtttagactttcgggaaaaaagtttagatagttctgcg
gcacgtttggaaagatttcaccaaaccatcaagaaacaacaaggtgatttgaccgctacc
caaacgaaaattgatgaaaccaaaaagcaagcgcgtgatttggtagcacaacgcgctgcg
gtggtttacgaaaagagtggattaactccagaacaaacccgacaattagtgattcaaaat
acagaaactaagttaaaacaagactatgatgtgaccgttcgtgaaaatcatgatgatatg
gtttggaatgctaaaaaagaagctaacaacttaatgattaaggcgttggaatgtggggtt
caagatgttccaagagaccacattgatcgcaatatcattattccagacgaagcaattcgg
aataagattactggtagagcagaacagtggttacgattagtcgaaagtttagccggagtg
gatttgatttttcaccccgaatatccagaagttttaattattaacactaatgatccaatt
cgacgtgaaatcacacgggaaaccattaatgagttagtggcatctcgccaaattaatgcg
gcagtgattgaaaatatcgtcaacgaggtgcaacgccgagtaatggataatcttcgaatc
tttggtgaagaaacttgtaaccaacttcgcttaggctgggttcatcccgatctaatgaag
ttgattggtcgtttgaaataccggactagttacagtcaaaatgtcttgcaacattccgtt
gaagtagcggaactttgtggtgcaatggcattggaactaggcttaaatgtgcgccaagct
aaacgagctggtttattgcatgatattggaaaggcaattgaccgagaagttaacggaact
cacgttgagttaggggtgcgaattaccgaagcctttgaggaaagtgatgtcatcattaat
tccattgccgcatctcacggggatactgaaaccgataacctaattgcggtgttagttaaa
gttgctgactcaatgtctggagctcgtccaggtgctcgtagcgaatccgttgaagaatac
attaatcgtttgaagggcttagaaagaattgctaatagtcatgaaggtgtcaaagatagc
tatgcaattcaagctggtcgtgaagttcgcattattgtagatccacggatggtaaccacc
gaacaaggggaagccattacgcgcgatgtctgtgatcaaatcgaagccgaattaacttat
ccaggtaagattaaggtaaccaccattcggaaactaaacgttgtccaatatgtgggtgga
aaacctaatctaaagaaaaagaaacacgctagttaa
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