Candidatus Formimonas warabiya: DCMF_00315
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Entry
DCMF_00315 CDS
T07208
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DCMF_00315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fwa03400
]
DCMF_00315
Enzymes [BR:
fwa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DCMF_00315
DNA repair and recombination proteins [BR:
fwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DCMF_00315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ATW23444
UniProt:
A0A3G1KM22
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All DBs
Position
74466..75224
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AA seq
252 aa
AA seq
DB search
MKIVSWNVNGLRAVQKNGFLDWVQKEQPDILCLQETKIQEDQLTEELKGIPGYQAYFSFA
QRKGYSGVATYVKEEPLFVRYGIDDPKFDGEGRILITGYADFTLFNIYFPNGQKDDQRLN
YKMEFYDAVLAYCDQLVSQGSKLIICGDYNTAHQEIDLKNPKSNEKRSGFLPEERAWMDK
FSAHGYIDTFRWFYPDLVKYSWWSYRFNAREKGVGWRIDYHFVSQNLIEKIKKADILDDV
MGSDHCPVIIEL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatagtttcatggaatgtgaatggactgagagcggtgcaaaaaaacggtttcctg
gattgggtgcagaaagaacaaccggatattttatgcttgcaggaaaccaaaatacaagag
gatcaactgacagaagaactgaaagggatccccggctatcaggcttatttttcttttgcc
cagcgtaagggctacagcggagtagctacttatgtgaaagaagaacccttatttgtgcgg
tatggcattgatgaccctaaatttgacggagagggcaggatcctgatcacggggtatgcc
gattttaccctgttcaatatttacttccccaacggacaaaaggatgatcagcgtctcaac
tataagatggaattttatgacgccgtgcttgcctattgtgatcaactggtcagtcagggg
tcaaagctaattatctgcggggattacaatacggcccatcaggagattgacctgaaaaac
cccaaatccaatgaaaaaaggtccggttttttgccggaagagcgggcctggatggataag
tttagcgcccacggttatatcgataccttccggtggttttatccggacctggtgaaatac
tcctggtggagctaccggtttaacgcccgggaaaagggtgtgggatggagaattgactac
catttcgtttcccagaatctgatcgagaaaattaaaaaggcggacattctggatgatgtt
atgggctccgaccactgtccggtgatcattgaattatag
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