Gossypium arboreum (tree cotton): 108451830
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Entry
108451830 CDS
T05776
Name
(RefSeq) polyubiquitin isoform X1
KO
K08770
ubiquitin C
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108451830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108451830
Ubiquitin system [BR:
gab04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
108451830
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
108451830
NCBI-ProteinID:
XP_017605009
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Position
5:89319684..89334400
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AA seq
609 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
LVLRLRGGF
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaacccttactggtaagaccatcacccttgaggtagaaagttct
gatactatcgataatgtcaaggctaaaatccaagacaaagaagggattcctcctgaccaa
caaaggcttatctttgccggaaaacaacttgaggatggccgaactcttgccgactacaat
atccaaaaggagtccaccctccacctagtgcttcgtctaaggggtggcatgcagatattc
gtgaaaactcttactggcaagaccatcaccctcgaggtggaaagttctgatacaattgat
aatgtcaaggccaagatccaagacaaggaagggatcccaccagaccaacagaggcttatc
tttgccggtaaacagcttgaagatggccgaactcttgcggattacaacatccagaaagag
tctaccctccaccttgtccttcgtcttaggggtgggatgcagatctttgtaaaaaccctt
actggtaagaccatcacccttgaggtggagagctccgatactatcgataatgtcaaggcc
aagatccaagacaaggaagggattccaccagatcagcagaggttgatttttgccggaaaa
caactcgaagatggtaggacacttgcagattacaacatccagaaagagtctaccctccac
cttgtccttcgtcttaggggtgggatgcagatttttgtaaaaaccctcaccggaaaaact
attacgttggaggtggagagttctgatacgattgataatgttaaggccaagattcaggat
aaggaagggatcccactggaccagcagaggttgatttttgctggaaagcagcttgaagat
ggccgaactcttgcggactataacattcagaaggaatcgaccctccatttggtgttacgt
ctccgtggtggcatgcaaatttttgtgaagactctcaccggaaagactattactttggaa
gttgagagttctgacaccattgacaatgtaaaagctaagatccaggacaaggaagggatt
ccaccagatcagcagaggttgatttttgctggcaaacagctcgaagatggtaggacactt
gcagattataatatccagaaagagtctacccttcacttggtgctccgactgcgtggtgga
atgcagatttttgtgaaaactttgactggaaaaactatcacattggaggtggagagctca
gacacaattgataatgtgaaggccaagatccaagataaggagggtatcccacctgaccag
cagaggttgatttttgctggaaagcagctcgaggatgggaggacccttgcggattataac
atccaaaaggaatcgaccctgcatttggttttgcgacttcgaggagggatgcagatattc
gtgaagaccttgaccggtaaaaccatcaccctggaggtcgagagctcggacaccattgac
aatgtgaaagcgaaaattcaggacaaggaggggattcctccagaccagcagaggttgatt
tttgctggaaagcagctcgaggatgggaggacccttgcggattataacatccaaaaggaa
tcgaccctgcatttggttttgcgacttcgaggagggatgcagatattcgtgaagaccttg
accgggaaaacaatcaccctggaggtggagagctcagacacgatcgacaatgtgaaagcg
aaaattcaggacaaggaggggattccaccagaccagcagaggttgatatttgctggtaag
cagttagaggatggtcgaactctagctgactacaatatccagaaggagtccacactgcat
cttgtccttcgcctccgtggtggtttctaa
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