Gossypium arboreum (tree cotton): 108453012
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Entry
108453012 CDS
T05776
Name
(RefSeq) pumilio homolog 2-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
gab
Gossypium arboreum (tree cotton)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
DUF445
Motif
Other DBs
NCBI-GeneID:
108453012
NCBI-ProteinID:
XP_052884285
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All DBs
Position
5:complement(7041221..7051020)
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AA seq
1052 aa
AA seq
DB search
MSSRNLRMLSELGRRPMLGSGEGSFGDDLEAEMGLLLREQRSKQDADDLERELNLYRSGS
APPTVEGSLSAVGGLFGGGATIAAGTAAGTGATAFSAFAGAKNGNGFASEEELRSDPAYH
SYYYSNVNLNPRLPPPLLSKEDWKFAQRLKGGSSVIGGIGDRRKVNRADNGSGRSLFSMP
PGFDSRKLENEIEAEKVHNSANWGGDGLIGLSGIGLGSKQKSLAENFQADLGHSTPVTRI
PSRPSSRNAFDENCENFGSAESDLAHLRHELASVDALRSSVSVQGSSAVHITGPPSSYTY
AAAVGTSLSRSTTPDPQLVARAPSPCLTPIGGGRVGNSDKRNLNSPSTFGGVSSGVSESA
DLVVALSGMTLSSNGAPDEDNRLPSQTEQDAENSQNYLFSLQDGQNYIKQQAYLKKSESG
HLDMPLAKNNRRAEFQKSAASSNNSYLKGSPTSTLNGGGSLPAQYQHGDGAKSSFPNYGI
SGFSLNPGLASMMASQLGTGNLPAGSTIPVPGMDSRVFGGDLGSGQNISSAASESLNLGR
IGSQIAGNALQAPFVDPMYLQYLRTSDYPAAQLPAFNDPCMDRNFLGDSYMNLLELQKAY
FGSLLSPQKSQYGVPLGTKSGGSNIHGFYGNSTFGAGMSYPGSPLANTFIPNSPVGLGSP
IRHTDLNMRFPSGTRNLPGGVTGTWHLDAGYNLDESFASSLLEEFKSNKTKCFELSEISG
HVVEFSADQYGSRFIQQKLETATPEEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLP
AQRRELACKLLGHVLSLSLQMYGCRVIQKAIEVVDLDQKINMVHELDGSVIRCVRDQNGN
HVIQKCIECVPEENIQFIVSTFFDQVVTLSTHPYGCRVIQRILEHCEDQKTQSKVMDEIL
RSVSLLAQDQYGNYVVQHVLEHGKPHERSIIIKELAGKIVQMSQQKFASNVVEKCLTFGG
PAERQLLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNAL
KKYTYGKHIVARVEKLVAAGERRIAAQSVHPS
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaggaatttgagaatgctatctgaattgggtaggagaccaatgttaggaagt
ggcgaaggatcatttggggatgatttggaggcggagatggggctattgctccgtgaacag
cgtagtaagcaagacgctgatgatctcgaacgagagctgaatttgtatagaagtggctct
gcacctcctaccgtggagggttcactgagtgcagtcggcgggttgtttgggggtggagcc
actatcgctgctggtactgctgctggtactggggctactgctttttcagcttttgctgga
gctaaaaatggaaatggttttgcatctgaggaagagcttaggtctgatccagcttatcat
tcatactattactcaaatgtgaatctcaacccgaggctcccacctcctttgctttccaag
gaggattggaagtttgcacaaaggttgaaaggagggagttcagtgataggggggattgga
gataggaggaaagtgaatagggctgataatggtagcggtaggtcgctgttttcgatgcca
ccagggtttgattccaggaaactagagaatgaaatagaagcagagaaagtgcataactca
gcaaactggggtggtgatggactgattggtttgtctggtataggacttggaagcaaacag
aaaagcctcgctgaaaattttcaggctgatttgggacactctactcctgtcacaagaata
ccgtctcgtccttctagtcgtaatgcttttgatgagaactgcgagaattttggttctgct
gaatctgatctggctcatttgcgccatgaactagcttctgtggatgctttaaggtcaagt
gtgagtgttcaaggttcatctgcagtccatatcaccgggccaccttcttcttacacttat
gctgctgcagtaggcacttccttgtctaggagtacaactcctgatccccaacttgttgca
agggctcctagtccttgtttgacaccaattggaggaggcagagtcggtaactcagacaaa
agaaacttaaatagtccaagcacgtttggtggtgtctcatctggtgtcagtgagtctgca
gatctggttgttgctttgtcaggcatgaccctgtcatcaaatggtgcaccagatgaagat
aataggttaccatcccagactgaacaagatgctgaaaatagccaaaattatttgttcagt
ttgcaagatggtcagaattatatcaaacagcaggcatacttgaagaagtctgaatctggc
catttagatatgcctttggctaagaataataggcgagctgagttccagaaatctgctgcc
tcctcaaacaattcttacttgaaaggatctcctacttccactctcaatggcggaggcagc
ttacctgctcagtatcagcatggtgatggtgcaaagtcatcatttccaaactatggaata
agtggtttctctttaaatcctggtttagcctctatgatggctagccaacttgggactggt
aatctgccagctggatcaactataccagtccctgggatggactcaagagtgtttggggga
gatttgggttctggacagaacatttcaagtgctgcatctgagtcgcttaatctggggaga
attggaagccaaatagctgggaatgctctgcaggcaccttttgttgatcctatgtatctt
cagtatttgaggacatctgattatcctgcagcacagcttccagcttttaatgatccctgt
atggataggaacttcctaggtgattcctacatgaacttgcttgagctgcagaaggcatac
ttcgggtctctgctatcaccacagaaatctcagtatggtgttccattgggaacaaaatct
ggtggttctaatattcatggtttttatggaaattccacctttggagctggcatgtcatat
cctggaagtcccttagcaaatacgtttattccaaactctccagttggacttggtagtcct
atcagacacactgacctgaatatgcgatttccttctgggacgaggaatcttcctgggggt
gtcacgggaacctggcatttggatgcaggatataacctggatgagagctttgcctcctcc
ctacttgaagagtttaagagcaataaaacaaagtgttttgagctttcagaaatttctggt
catgttgttgagttcagtgcggatcagtatggaagccgttttattcagcaaaaacttgaa
actgctacacctgaagagaaaaatatggtttatgaggaaatcatgcctcaagctcttgct
ttgatgactgatgtgtttggtaattatgtcattcaaaagttttttgagcatggacttcca
gctcagagaagagaacttgcttgcaagcttttaggtcatgttttatcactcagtcttcaa
atgtatggttgccgagtgattcagaaggccatagaggttgttgatctggatcagaagatt
aacatggtgcatgagcttgatggtagtgttatacgttgtgtacgagaccagaacggcaac
catgtcatccagaaatgtatcgaatgtgttcctgaggaaaacattcaatttatagtctca
acattttttgatcaagttgtgacactttccactcatccttatgggtgccgagttatacag
agaatattggagcactgcgaggaccaaaagacacagagtaaggttatggatgagatttta
agatctgttagcctgttggcccaagaccagtatggcaattacgttgtccagcatgtgctg
gagcatggaaaacctcatgaacggtcaattatcattaaggagctagctggaaagattgtc
cagatgagtcagcagaagtttgcatctaatgttgtcgagaagtgcttaacttttggtggc
cctgctgaacgtcagttattggtgaatgaaatgcttggttctactgatgagaatgagcct
cttcaggcaatgatgaaggatcagtttgcaaactacgttgtacagaaagtactggagact
tgtgatgaccagcaacgcgagctgattctttctcgaattaaggtccatttaaacgcattg
aagaagtacacatatgggaagcatattgttgcgcgtgtagagaaacttgttgctgctgga
gagaggagaattgctgctcagtctgtgcacccttcttaa
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