Gossypium arboreum (tree cotton): 108454523
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Entry
108454523 CDS
T05776
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108454523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108454523
Spliceosome [BR:
gab03041
]
Common components
Common spliceosomal components
SR proteins
108454523
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_occluded
RSRP
Transformer
Motif
Other DBs
NCBI-GeneID:
108454523
NCBI-ProteinID:
XP_017608501
LinkDB
All DBs
Position
11:1539482..1543691
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AA seq
259 aa
AA seq
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MSGRFSRTIYVGSLPSDIREWEVEDIFYKYGRILDIELKIPLRPPCFCFVEFEDPRDAED
AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGAAAKFGVSRHSEYRVIVRGLPSS
ASWQDLKDHMRKAGDVCFVEISRDSDGTFGIVDFTNYDDMKYAISKLDDTEFRNPWARAY
IRVRRYESSPSRSRSRSRSRNRSRSLSVKRDRSKSRERPASNSPVKARSVSPVKSSRARS
RSRSRSRSGSPDKAGPVSH
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgcttctctcgcactatctatgtcggcagcctaccctctgatattagagaa
tgggaggttgaagatatattctacaagtatggtcgtattttggatattgaattgaagatt
ccactccgccctccatgtttttgttttgttgagtttgaggatccccgggatgctgaagat
gcaatcagaggtcgagatggttataactttgatggttgtcgtttgagggttgagcttgca
catggtggtagaggacaatcctcaagtgatcgtcgaggcgggtatggtggcgctgcggct
aagtttggtgtatcacgtcattctgaatatcgagttatcgttcgtgggctcccttcttct
gcttcctggcaagatttgaaggatcacatgcgaaaagcaggtgatgtgtgttttgtggaa
atttcacgtgacagtgatgggacctttggtatagttgattttaccaattatgatgacatg
aaatatgctatcagtaaacttgatgataccgagtttagaaatccttgggcaagagcttat
attcgggtgaggagatacgagagcagcccctccaggagtagaagtagaagcagaagcaga
aaccgtagcagaagcctcagcgttaaaagagaccggagtaaatcacgggaaagacctgca
tccaactcaccagttaaagcaagatctgtctctcctgttaagtcatctagagcaagatcg
aggtcaaggtcaaggtcaaggtcaggatcacctgacaaggctggaccagttagccattga
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