Gossypium arboreum (tree cotton): 108456744
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Entry
108456744 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108456744
KO
K14827
pre-rRNA-processing protein IPI1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108456744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108456744
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
108456744
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_MROH2B_C
TPR_DNAAF5
HEAT_2
Cnd1
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
108456744
NCBI-ProteinID:
XP_017610873
UniProt:
A0ABR0NRT4
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Position
9:77040112..77050569
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AA seq
860 aa
AA seq
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MVRSKASSKKQQKKGIDFKKIKRKLGRKLPPPKNATNTEIKSKAIVLPEQSVATNKEGLA
VSKKGLTLKELLQQTSHHNAKVRRDALMGIKDLVLNHPAELRLHRYAVIEKLRERISDDD
KVVREALYQLFKSEIFPGCAEDNQGLLISLLMTYIFNAMTNLAIDIRLMAFKFFDLVVQY
YPPCFSLYAEKILQSYEDILRKNQYYVEDKGKLRTTLSGLVRCLSLLPSKKPESEKGISG
DRMIHAFEPDAPTANTGFSTIIKKLKELVLVLINCFQEFIPLLISMPQLDAQSFDCILSI
LQSIDIAVRFFIYGTHEVAPESICNQTLSSPLSKKLLGAFPLYPKHHLSVKEDDRYFILN
IVITEIFLHLRGWICPSANLFEKFLEFIENALLGTICCSTRSGKAAWEKHVSSLLPFIPK
LASEVETCWQSRILESFTQTFKGCNPESSLKLACLSMIEEMLIPNGDKHYTEASDTVVLD
FQTVWIRELPLLLMLLGDRQPSSSQVVLRLLLRLGQFSGSNSFLFWEYENTQFALSEFYS
TCEEGNIYYGPFMRLPRDCQELSICCLYYFSNLSALFLKSVALCCLCPQLEPFVSFRILE
VLHAAYKAGHIQIADHISFFMTLLSRFKVFPENIDPVRESDVKVSNHGAFKSLTSVLCSY
LSQMGDSSVVLQILDKAIIGLILLQPPLDNACAMLRVLIVLDSKPTRLSEQSIIALSNFL
PGYLMDVVHCIPEDDVRTWRYYLLPCFFLFDRSNRILKLVLDVIGSFLTDSNLSLPSDTS
TRYATDSLSRINATISLLLLMYKDIKVQKIISLFRTEVSSILQSIASLQSSEVKMTLEER
HRFQCSFEQLKVVTSTSPAG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgttcgaaggcttcttcaaagaagcagcaaaagaaaggcatagatttcaaaaaa
ataaagagaaagctaggcaggaaattgcctccaccgaagaatgccacaaatactgaaatt
aaatccaaagcaattgtacttcctgagcagagtgtggcaacaaacaaggaaggtttagct
gtgagtaagaaaggattgactttgaaagaacttcttcagcaaacatctcatcataacgcc
aaagttcgaagggatgcattaatgggaatcaaggatttagtccttaatcatccagcagag
ttgaggctgcacagatatgcagttatagagaaactgcgggagcggataagtgatgatgat
aaagtagttagagaagcgttatatcaactgtttaagtctgaaattttccctggttgtgct
gaggataatcaaggacttctcatctccttattgatgacatatattttcaatgcaatgaca
aatttagcaattgacatccgcttgatggctttcaaattttttgatcttgttgtgcaatac
tatcctccttgcttttcattatatgctgagaagattcttcagagctatgaagatatttta
aggaaaaaccagtattatgtagaagacaagggaaagctcagaactactctttcagggtta
gtccgctgcctgtcactgttgccaagcaaaaagccagaatctgaaaagggtatttcagga
gacaggatgatacatgcttttgagcctgatgcaccaacagcaaatactggtttctctacc
attatcaagaaactaaaggagcttgtgctagttctaataaactgtttccaagaatttatt
ccattgctcatttctatgccacaactggatgcacaatcatttgattgtatattatccata
cttcaaagcatagatattgctgtaagattttttatttatggtactcatgaagtggcacct
gagtcaatatgcaatcaaactctctcatcacccttgtcaaagaagttattgggagcattt
cccctttatccaaaacaccacctttctgtgaaggaggatgatagatattttatcctgaac
attgtcataacggagatatttttgcacctccggggatggatctgcccttctgcaaatttg
tttgagaaatttctcgagtttatagagaatgcactactcggcacgatttgttgtagcaca
cgttctggtaaagcagcatgggaaaagcatgtatcttcattgcttcctttcattcccaaa
cttgcatcagaagtggaaacttgttggcagtcacgcattcttgagtcatttactcagaca
ttcaagggttgcaatccagagtcttcacttaaattggcttgcctgtccatgattgaagaa
atgttaattcctaatggagataagcactatactgaagcaagtgatactgtggtattagac
tttcagactgtttggataagagagctgcccttgttgttaatgctacttggtgatagacaa
ccatcctcttctcaggttgtcttgcgccttcttcttcgtcttgggcaattttctggttca
aactcttttcttttttgggaatatgaaaatactcaatttgcactcagtgagttttacagc
acatgtgaagaaggaaacatatactatggtcctttcatgagacttcctagggattgtcag
gagttgtctatctgttgcctttattatttctctaacttgagtgctctttttctgaaatca
gtagctttatgttgcctgtgtcctcaattggagccatttgtatctttccgcattttagag
gttctgcatgctgcctacaaagctggacacatccaaattgctgaccacatcagcttcttc
atgactttactatctcgtttcaaagttttccctgaaaatatagatcctgttagagaaagt
gatgtgaaggtttcaaatcatggagcttttaagtctctcaccagcgtgctttgctcatac
ttgtcacagatgggtgatagttctgttgttttacaaatactagataaagcaatcattggc
ttgatattgttgcaaccacctcttgacaatgcatgtgcaatgttgagagtgctcattgtg
ctggactctaaacccactaggctttctgaacaaagtataattgctctaagcaatttcctt
cccggatatcttatggatgttgtgcattgtattccagaagatgatgttcgcacatggcgt
tattaccttctaccatgctttttcttgtttgataggagtaacaggattctgaagcttgta
ttggatgtaattggttcatttttaactgacagtaatttgtcgcttccatctgatacctct
acaagatatgccactgacagtctcagtcggataaatgcgactatttctctgctactatta
atgtacaaggacattaaagttcagaaaattatttctttattcagaacagaggtcagctca
attttgcaaagcatagcttctttacagtcttcagaagtcaagatgacccttgaagaaagg
cacagatttcaatgttcatttgaacaattaaaggtggttactagtacatcaccagctggc
tga
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