KEGG   Gossypium arboreum (tree cotton): 108464484
Entry
108464484         CDS       T05776                                 
Name
(RefSeq) probable pectate lyase 12
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108464484
Enzymes [BR:gab01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     108464484
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 108464484
NCBI-ProteinID: XP_017620302
UniProt: A0ABR0QQJ6
LinkDB
Position
2:113388027..113392816
AA seq 481 aa
MLSISCIVLFFLLSSFFPFTISTFNLTVPIPHPNPNEVAQEVQRRVNASISRRETLQTTQ
KDISSCLTGNPIDDCWKCDPDWPNNRQRLADCAIGFGQYAKGGKGGEYYIVTDSSDDDAV
TPRPGTLRYAVIQEEPLWIVFPSNMHIKLKQELIFNSYKTLDGRGANVHITGGGCITLQY
ISNVIIHNVHIHHCYQSGEANVRSSPTHFGWRTESDGDGISIFGAKDIWIDHCSLSHCKD
GLIDAVMGSTGITISNNFFSHHNEVMLLGHSDDYEPDSGMQVTIAFNHFGEKLVQRMPRC
RRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPSNPNAKQVTKRVDTDEGDWKGW
NWRSEGDVMVNGAYFVASGEGVEFKYEKAYSVEPKSAVLIDQLTMHSGVLGVGGRDNNLG
KWSSGANGGGSGFDSGDDEDDDYSDDMSGSDISLSTPFLPLFIAMSSFLLLCFEPITSPM
L
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgttgtccatcagctgcattgtcttgttcttcctcctctcctcattttttcccttcact
atatccacattcaacctcaccgttcctatcccacatcccaatcccaacgaagttgctcaa
gaagttcaaaggagagtaaatgcttcgatttcaagaagggaaaccttacaaacaacccaa
aaagatatatccagttgtttaacaggtaaccccattgatgattgttggaaatgtgaccct
gattggcctaacaatcgacaacggttagccgattgtgccatcggtttcggtcaatacgct
aagggaggcaaaggtggtgagtattacatcgtgacggattcgtccgatgacgatgccgtg
acaccaaggccaggaacacttaggtatgcagtgatacaagaagagccattgtggattgtg
ttccctagtaatatgcacattaagctcaaacaagaacttatatttaatagctataagaca
ttggatggacgtggggctaatgtgcatattaccggcggtgggtgtattactttgcaatat
atcagcaatgtcattatccacaatgtacacatccaccattgttatcaatcaggtgaggca
aatgtaagatcaagtccaacacatttcgggtggagaacagaatctgatggtgatgggatc
tccatctttggagcaaaagacatatggatagatcattgctccttatcacattgcaaagac
gggttgattgatgcagtgatgggatcaacagggatcaccatatccaacaatttcttctct
catcacaatgaagtgatgttgttgggtcatagtgatgactatgagcctgattcagggatg
caagtcaccattgcctttaaccatttcggtgaaaagctggttcaaaggatgcctaggtgc
cgacgagggtacattcatgtggttaataatgatttcactcaatgggagatgtatgctatt
ggtggtagtggaaaccccaccattaatagccaagggaaccgttatactgcccctagtaat
cccaatgccaaacaggtgacaaagagagtggatacagatgaaggagattggaaagggtgg
aattggagatcagaaggtgatgtgatggtgaatggagcttactttgttgcctccggtgaa
ggtgttgagtttaagtatgaaaaagcttatagtgttgagcctaaatcagctgtcctcatt
gaccaactcaccatgcactccggtgttcttggagttggtggcagggacaacaatttgggg
aagtggagcagcggagccaacggcggtggaagcggttttgactcgggtgatgacgaagac
gacgactattctgatgacatgtcgggaagcgacatatcgttatcaactccatttttacct
cttttcattgcaatgtcaagctttttgttgttgtgttttgaacctattacatcacccatg
ttgtga

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