Gossypium arboreum (tree cotton): 108467436
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Entry
108467436 CDS
T05776
Name
(RefSeq) pre-mRNA-splicing factor 18-like
KO
K12817
pre-mRNA-splicing factor 18
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108467436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108467436
Spliceosome [BR:
gab03041
]
Complex C
Other components
Step II factors
108467436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
108467436
NCBI-ProteinID:
XP_017623535
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All DBs
Position
3:complement(45453646..45456426)
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AA seq
415 aa
AA seq
DB search
MDLLKEELLKKRQSLAQETGGRRVFKRSEIEQKQIQKLREQEKRELEAKSRRQSNASSSA
ANDASAKSNPSASSTVSATATSAAGSSKSLTDERNIDDLDLPKQEVIRRLRFLKQPVTLF
GEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKTGIVSERKRKDREE
GGGGEDGDGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCGEDKILVFFKRLLDEWNQ
ELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECCMKRD
YLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRL
MTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKFSGGNSSEERLRLMPAPKEN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctcaaagaagagcttctcaagaagcggcaaagcttagctcaggagaccggc
ggcaggcgtgtatttaaacgctccgagattgagcagaagcaaatccagaagcttcgcgag
caagaaaaacgagaactcgaagctaaatctcgccgtcaatcgaacgcctcttcctccgct
gcgaacgacgcttcggctaaatccaatccttccgcttccagtactgtctccgcgactgcg
acttccgccgccggttcttccaaatccctcaccgatgaacgaaatatcgatgacctcgac
cttccgaagcaagaagtcattcgccggcttcggttcctcaaacagcctgtcactcttttt
ggggaagacgacgcggctcgtctcgacaggttgaaatacgtcttaaaagctggacttttc
gaagtcgatagcgatatgaccgagggtcaaactaatgatttcttgagagacatagcggag
ttgcggaagcggcagaagacggggatcgtgagcgagaggaagaggaaggatagggaggaa
ggtggtggaggagaggacggggacggaggcggcggagaagaagagctgagtggtgatggt
ggatcaagcggagttgatatggacaaggacttgaaaagaatgaaggcgaatttcgatgag
ttgtgtggtgaagataagattctggtgtttttcaagagattgttggatgagtggaatcaa
gagctggatgagatgggtgaggctgagaaaaggacggcgaaaggcaagtccatggtcgcc
acgtttaagcagtgcgctcgttatttgaatcccttgttcaagttttgtaggaagaaggtt
cttcccgatgatatccgtcaagcattattggtggtggttgagtgttgcatgaagcgggac
tacctagccgcaatggaccagtacattaaattggctatcggtaatgcaccctggccaatt
ggtgtcactatggttggtatccacgaacgttcagctcgtgagaagatctacaccaacagt
gttgcacacataatgaatgacgagacaactcggaaatacttgcaatcaatcaaaagattg
atgaccttttgtcaacgccgttaccccacactcccatctaaagcggtcgagttcaacagc
ttggccaacggtagtgacttacagtcactgctcgcagaagagaagttttctgggggtaat
tcttcagaggaaaggcttaggctaatgccagctccaaaggaaaactag
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