Gossypium arboreum (tree cotton): 108475979
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Entry
108475979 CDS
T05776
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108475979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108475979
Spliceosome [BR:
gab03041
]
Complex A
U1 snRNP components
U1 related factors
108475979
Complex B
108475979
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
108475979
NCBI-ProteinID:
XP_017633493
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All DBs
Position
5:2114525..2120610
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AA seq
936 aa
AA seq
DB search
MAESPSSPAALDTTNSQSKPDSDNPNPLPTQPDPSPSSTVSTQLQPNPNPSAPPVSPQPP
PAVPSYSTPPPPISGAATAVPPAPPSFRPVPQFSPLPNFQPPGLQPPGVSSAPGSIPPPL
MQYQVPAGQVPNPALRPFAPIPNGYAALPGAVPPGTMPPPGLLRYPSPYPAMIRPPFPPR
PPGAIGVMPTVSRPPVPGARPIIPPVIRPAVPNVTPTEKPQTTVYIGKIAPTVDNDFMLS
LLHLCGPVKSWKRPSNGTPKAFGLCDFESAEGVLRAVRLLSKFNIDGQELVVNVSQATKE
YLEKYVEKKTENAKKLNEPPSAESEKEGENAVGDVKNESSTTSVEDPKKNSDSANKENIM
DIANSGIVTDEDREADRDASEKLAGMIEERLKTNPLPPPPPQTAPDGSGKSNSDLPVKSR
DGNSDIDLMRNDGAEGKNDDETTSESKATIENDRPETSSPDRRYDRSRDREQDLKRDKER
EIERLERETERERMRKEREQRRKIEEAEREYEKFLRDWEQREKDKEKQRQYEKEREKERE
RKRKKEIRYDEEDDDDEDSRKRLRRSVLEEKRRKRLREKEDDLADRLKEEKEIAEAKKRA
EEEQLQLQQQRDALKLLSGRFANGAAKNVLAEEPSTESKDKAVEQHYEHESSHENQISGD
GNMQNGSVDESNVAFVSASDTRQSGNAPRKLGFGLVGSGKRTTVPSVFHEEEDDDAQKEK
KMRPLVPIDYSTEELQAVQPGAPAPNLVAAAEFAKRISNVNPKEEKSDAERERSRRSYDK
SSRDKDRNDEDSRSRDESKEKIPDRDRDREHGQDKVKTTDNQKLLDAKQLIDMIPKTKEE
LFSYEINWNVYDQHALHERMRPWISKKITEFLGEEEKTLVDYIVSGTQEHVKASQMLELL
QSILDEEAEMFVLKMWRMLIFEIKKVETGLALRSRS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatctccctcgtctccagcagccctagacaccaccaattcccaatctaaaccc
gactccgataatccgaatccactaccaacccaacccgatccatctccttcctctaccgta
tcaacacagctccaaccaaaccctaaccctagcgcccccccggtatctcctcaacctcct
cccgccgttccttcctactcgactcctccaccgccgatctccggagctgccacagccgtt
cccccggcgcctccttcgttccgtccagtcccgcagttttcgccgttaccgaattttcaa
cctcctggcttgcagccgccgggcgtgagttcggctcctggttctattccgccgccgttg
atgcagtaccaggtgcctgcaggtcaggttccgaatcctgctcttagaccgtttgctccg
attccaaatggatatgcagcgctaccgggagctgttcctccgggcaccatgcctcctccg
ggacttctccgctatccctctccttacccagcaatgattcggcctccattccctccacgc
ccacctggagctattggtgtgatgccaacagtttcacggcctcctgttcctggtgctcgc
ccaattattcctcctgtcattagaccagctgttcctaatgttactccaacagagaaacca
caaacgacagtttatattggcaagatagcaccaacagtggacaacgacttcatgctgtct
ctccttcatctttgtggacctgtcaagagttggaaacgcccctctaatgggacaccaaaa
gcatttgggctttgtgattttgagtctgctgaaggggttcttcgtgcagtgcgcctactt
agcaaatttaatattgacggacaagaattagtggtaaacgttagtcaagcaacaaaggaa
tatctggagaagtatgttgaaaagaaaactgaaaacgcaaagaaactaaatgaacctcca
tctgcagagtctgagaaagaaggtgaaaatgcagtaggtgatgtgaagaatgaatcttca
acaacttctgttgaggatccaaagaagaacagtgacagtgccaacaaagaaaatatcatg
gacattgccaactctggcattgtcactgatgaagaccgtgaggctgatcgagatgcttca
gaaaagcttgctggcatgattgaggaaaggttaaagaccaatcctctcccaccaccacct
ccacaaactgctcctgatggttctgggaaatcaaattcagatttgcctgttaaatcaagg
gatgggaactctgatattgatttaatgagaaatgatggagctgaaggtaaaaatgatgat
gagactaccagtgagagcaaagcgacaattgaaaatgatcgacctgagacaagctcacct
gatcgtagatatgataggagtagagacagagagcaagatcttaagagggacaaggagcgt
gaaattgaaagattagaaagagaaacagagcgtgaaaggatgagaaaagagagggaacag
agaaggaagattgaggaggcagagcgtgagtatgaaaaatttcttagagattgggagcaa
agagaaaaggacaaggagaagcaaagacagtatgagaaggaaagggagaaagagagggaa
cgcaaacgaaagaaggagattcgctatgatgaagaagatgatgacgatgaagattcaaga
aaaaggctgcgtaggagtgttttggaggaaaagaggaggaagagattgcgggagaaggag
gatgacttggctgatagactcaaagaagagaaagaaattgctgaggccaagaaaagggca
gaggaggagcagctgcaactgcagcagcagcgagatgcattaaagcttttgtctggtcgc
tttgcaaatggagctgcaaagaatgtgttggctgaagaacctagcaccgaaagcaaagat
aaggcagttgaacagcattatgagcacgaatcaagtcatgaaaaccagatatctggtgat
gggaatatgcaaaatggttctgttgatgaatcaaatgtggcctttgtttctgcatcagat
acacggcagagtgggaatgcaccaaggaagttaggttttggtctagttggatctggaaag
cggactactgtcccatctgttttccatgaggaggaagatgatgatgcacagaaggagaag
aaaatgaggcccctggttcccattgattactctactgaggaactgcaggctgtccaacct
ggcgcaccagcaccaaatctggttgcagctgctgaatttgcaaagcgaatatcaaatgtt
aaccctaaagaggaaaagtctgatgcagaaagagagcgaagcagacgttcttacgataaa
tctagtagggataaagatcgtaatgatgaggacagtcgcagcagagatgagagcaaagag
aagatccctgatcgggatagagacagggaacatggacaggataaggtgaaaacaacagat
aaccagaagcttttggatgccaaacaactaatcgatatgattcctaagaccaaggaggaa
ctattctcatacgagataaactggaatgtgtatgatcagcatgcattgcatgagagaatg
agaccctggatctcaaagaaaattacggagtttttgggagaagaagagaaaacactggtt
gattacatcgtgtcgggtactcaggaacatgttaaggcttcccaaatgctggagctgctg
cagtctatattagatgaagaagcggagatgtttgtgcttaagatgtggaggatgctgata
tttgaaattaaaaaagtagaaactggcctggctttgcggtcgagatcctga
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