Gossypium arboreum (tree cotton): 108480834
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Entry
108480834 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gab03110
]
108480834
Chaperones and folding catalysts [BR:
gab03110
]
Heat shock proteins
HSP100
108480834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
bpMoxR
nSTAND3
IstB_IS21
AAA_14
AAA_7
AAA_18
ATPase_2
TniB
NBD_SMAX1
NACHT
ResIII
AAA_25
DUF815
AAA_19
DUF2987
AAA_13
Motif
Other DBs
NCBI-GeneID:
108480834
NCBI-ProteinID:
XP_052883710
LinkDB
All DBs
Position
1:19549302..19552636
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AA seq
909 aa
AA seq
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MNPDKFTHKTNEALAGAHELATSNGHAQFTPLHLAVALISDSQGIFYQAISNAGGDGVAQ
SVYRVFNQALKKLPAQSPPPDQVPASSSLVKAVRRAQAAQKSRGDTHLAVDQLILGLLED
SQITDLLKEAGVTPAKVKSELEKLRGKEGKKVESASGDTTFQALKSYGTDLVEQAGKLDP
VIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLVA
LDMCALIAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVLDTVSILRGLKEKYEG
HHGVRIQDRALVIAAQLSSRYITGRHLPDKAXDLVDEACANVRVQLDSQPEEIDNHERKR
MQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLLPLMMKYRKEKERVDEIRRLKQKR
EELMLALQEAERRYDLARAADLRYGAIQEVESALAQIQGTADENIMLTETVGPEHIAEVV
SRWTGIPVTRLGQNEKERLIVLAERLHQRVVGQNQAVDAVAEAVLRSRAGLGRPQQPTGS
FLFLCPTGVGKTELAKSLAEQLFDDENLLIRIDMSEYMEQHSVARLIGAPPGYVGHEEGG
QLTEAVRRRPYSIVLFDEVEKAHLSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GAEHLLSGLSGECTMHVARDRVMQXVRRHFRPELLNRLDEIAVFDPLSHDQLRKVARLQM
MDVASRLGERGIALAVEDSALDYILAESCDPVYGARPIRRWLEKKVVTELSRMLVKEEID
ENSTVYIDAPNGSELVYWVEKNGGLVNAETGQKADVLIRIPNGTRRSDAAQAVKKMKIEK
IDDEDEMDS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgataaattcactcacaagacgaatgaggctcttgccggggctcatgagcta
gcaacgagcaatggccatgcccaattcactcccctccatcttgcggtagctttaatatcc
gactcccaaggcatcttttatcaagcaatctccaacgccggaggtgatggtgtcgcacaa
tccgtctatagggtattcaatcaagccttgaaaaagcttccagcacagtcacctccacca
gatcaagtccctgctagttcttctcttgttaaggcagtccgtcgcgcccaagccgcccaa
aagtctcgcggggatacccatttggcggtcgatcaattgattctaggcctccttgaggat
tctcagattacggatttgttgaaagaagcaggggttacaccagcaaaagtgaaatccgag
cttgaaaagcttcgaggaaaagaagggaaaaaggtggagagtgcatcaggggacactaca
tttcaagcattaaaatcatatgggactgaccttgttgagcaagcagggaagcttgatcct
gtaataggccgagatgaagaaattagaagggtcattaggatcctgtctagaagaactaaa
aacaacccagttctaattggagaaccaggtgttggtaaaactgctgtggtagagggtttg
gctcaaagaattgtgaggggagatgtgcctagtaatcttgccgatgttcggctcgttgcg
ttggatatgtgtgcactgattgcaggagcgaaatatagaggagagtttgaagaaagattg
aaagcggttttgaaagaagttgaggaagctgaagggaaagtgattctcttcattgatgaa
atccacttagtacttggtgctggtcgaaccgagggttccatggatgcagccaacctcttt
aaacctatgcttgctaggggtcaacttaggtgcattggtgctactacgttggaagaatat
agaaagtatgttgaaaaagatgctgcatttgagagaaggtttcaacaggtttatgttgct
gagcctagtgtactggacaccgttagcatccttcgaggattaaaggaaaaatacgagggt
catcatggtgttaggattcaagaccgtgctttggtgattgcagctcaactgtcaagtcga
tatattactggacgtcatcttcctgacaaagcanatgatttggttgatgaagcttgtgca
aatgtgagagttcagcttgatagtcagcctgaagaaattgataatcatgaaaggaaaaga
atgcaactagaagttgagcttcatgcattggagaaagagaaggataaggctagcaaagct
cgactggttgaagtccggaaagaacttgatgatttaagggacaagcttctgccattgatg
atgaaatatcgaaaggagaaagaaagggttgatgagattcgaagattgaagcagaagaga
gaagaactcatgcttgctttacaggaggctgaaaggagatatgatttggcaagagctgct
gatttgagatatggggcgattcaggaagtggaatctgcactagcccagatccaaggcaca
gcagatgagaacataatgttaaccgaaacagttggacctgaacacattgccgaggttgta
agccgctggactggcattcccgtcacgaggcttggacagaatgagaaggagaggttgatt
gtgcttgcagagaggttgcatcaaagagtggtgggacaaaaccaggccgttgatgctgtt
gcagaagctgttttgaggtcgagagctggattaggaaggccacaacaaccaactggctca
ttccttttcttgtgtccaactggtgttggcaagacggagcttgctaagtcactagcggaa
caactctttgatgatgagaatctgctgatcaggatcgatatgtctgagtacatggagcaa
cattcagtggctcgacttattggggcaccacctgggtatgttggccacgaggaaggaggg
cagcttacggaggcagtgaggaggaggccttacagtattgtactctttgatgaagttgag
aaagcacacctctctgttttcaacacactacttcaagtcttggatgatggccggttaact
gatggccagggccgcactgtggacttcagaaataccgtgatcatcatgacatcaaacctt
ggagcagaacatcttctttcaggacttagtggggaatgtacaatgcacgttgctcgtgat
cgagtcatgcaataggtaaggcgacattttagaccagagttgctcaacaggctcgatgag
atcgccgtttttgaccctctatcacatgaccaattgaggaaagttgctagattgcaaatg
atggatgttgcaagccgccttggtgaaaggggtattgcattggctgtagaagattcagca
ttggactatattcttgctgagagttgtgatccagtttatggtgcaagacctattaggaga
tggcttgagaagaaagttgtgaccgagctatcaaggatgcttgtgaaggaagaaatcgat
gagaactcgacagtttacatcgatgctccgaatggaagtgagttagtgtattgggttgag
aagaatggagggttagtcaatgcagagactgggcaaaaagcggatgtattgattcgaatc
ccgaacggaacaagaagaagtgatgctgcacaagcagtgaagaagatgaagattgagaag
atagatgatgaagatgaaatggactcttga
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