KEGG   Gossypium arboreum (tree cotton): 108482206
Entry
108482206         CDS       T05776                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor B polypeptide 1
  KO
K03872  elongin-C
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108482206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gab04121]
    108482206
   03400 DNA repair and recombination proteins [BR:gab03400]
    108482206
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     108482206
   Cul5 complex
     108482206
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108482206
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 108482206
NCBI-ProteinID: XP_017640811
LinkDB
Position
7:complement(34577838..34580595)
AA seq 98 aa
MKRKDTVKLISADEMXFIIDKDAAMVSQTIGNMLTSPGGFAEMELGEVTFPEISAVILEK
ICQYFYWALQYSRGKETEFHIEPELTLELMMAPNYLHT
NT seq 297 nt   +upstreamnt  +downstreamnt
atgaagagaaaagatacagtcaaactcatcagcgctgacgagatgngatttattattgac
aaggacgctgccatggtttctcagaccatcggtaacatgcttacatcaccaggaggtttt
gcggagatggagcttggagaagtgacttttccggagataagcgctgtgattcttgagaag
atctgtcagtatttttattgggctcttcaatattcaaggggtaaagagactgagtttcac
attgaacccgaactgactctggagctgatgatggctcctaattatctccatacatag

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