KEGG   Gossypium arboreum (tree cotton): 108483939
Entry
108483939         CDS       T05776                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108483939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108483939
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108483939
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108483939
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 108483939
NCBI-ProteinID: XP_017642980
LinkDB
Position
6:complement(121195875..121198390)
AA seq 128 aa
MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL
YCDIPLGQYVIRGENVVIIGELDLEKEELPSRMNPVSEDEIKRAQKAEREATDLKGSMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggctggccctgatgatatctttctctccacctctcttgccacctatcttgac
aagaaactccttgtcctgctcagagatggccgaaagcttttgggattattgcgttctttt
gatcaatttgctaatgttgttctagaaggagcttgtgagcgagttatcgttggagatttg
tactgtgacatccccttaggtcaatatgtaatccgtggggagaatgttgtcataatagga
gagctggacttggaaaaggaggagcttccctcacgtatgaatcctgtatcggaagacgag
attaaaagggctcagaaagcagaacgggaagcaacagatctaaagggctccatgaggaaa
agaatggagttccttgattttgattaa

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