Gossypium arboreum (tree cotton): 108489097
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Entry
108489097 CDS
T05776
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108489097
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gab01001
]
108489097
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108489097
03036 Chromosome and associated proteins [BR:
gab03036
]
108489097
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108489097
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108489097
Protein kinases [BR:
gab01001
]
Serine/threonine kinases: Other
TAF1 family
108489097
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108489097
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108489097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
zf-CCHC_6
Rad60-SLD
HTH_3
Motif
Other DBs
NCBI-GeneID:
108489097
NCBI-ProteinID:
XP_017648865
LinkDB
All DBs
Position
10:36481336..36500150
Genome browser
AA seq
1896 aa
AA seq
DB search
MGHSSFPDEDDDEEEYEEEAGGSNRLLGFMFGNVDNSGDLDADYLDDDAKEHLAAVADKL
GPSLTDIDLSEKSPHTPADAADQDYDEKYENAIDYEDIDEEYEGPEIQAATEEDHLLPKK
EYFSADVSSALEPKASVFDDENYDEDEESEKEQEVVVEQEEHLAATVEVEKSPGHDVHCG
SSDSEDQVDGTEDLQEEPDAPEEPLDSKSSTPLPVLCVEDGMVILRFSEIFGIHEPLKKA
AKRDRGYFTHREKYKSMDASDLVEEDEEAFLKDAGQGFSFIGWENAIQQDRSEFTDDALV
KGGLEISEHSEEHVKDSYSNPEAMKEGVVVNLSSGLQSPSRPRFFPLDQLDWEEQIVWDN
SPARSDNSLESPEICVSDLEASVSRETIPETGQNLLSEQSTESYEKDHDSGLCHSSIVLE
SFDSKTSSGPMDLPFLESRFHPQLLRLGSQLRVDSLNDSDGKTDVTMDPDKSDVMKCFRK
LTLQNKDITEGSWLDNIIWEPHSVIAKPKLILDLQDEQMLFEILDNNESKHLQLHAGAMV
IARSAKPSSRSSEVSDHKHQSGWQFNIANDKFYLNRKVSQQLQSNPNKRMAHGVRVHHSA
PALKLQTMKLKLSNKDLANFHRPRAIWYPHDIEVAVRQQGRLPTQGPMKVILKSLGGKGS
KLHVDAEETVSSVKAKGSKKLDFKPSETVKIFYLGKELEDDMSLAAQNVPPNSLLHLIRT
RIHLWPRAQKLPRENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGANLC
TYYQKTSSGDQTSGLLRNGNETLGNVLLLEPADKSPFIGDIKAGYSQSSLETNMYKAPIF
SHKVPSTDFLLVRSPKGKLSIRRIDRIAVVGQQEPLMEVFAPGSKNIQTYLMNRMLVYVY
REFSASAKRGLIPFMGTDELFTHFPNLSDAIVRKKLKECAYLRRDKNGRQIWSMKPDFHI
PPEGVLRKLVSPEHVCAYESMQAGLYRLKHLGITRLTTLTSVSSAMSQLPDEAIALAAAS
HIERELQITPWNLSSNFVACTSQDRDNIERLEITGVGDPSGRGLGFSYVRTAPKAPVSNA
VMKKKTAAARGGSSVTGTDADLRRLSMEAAREVLLKFNVPDEVIAKQTRWHRIAMIRKLS
SEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVDGEENESDS
EANSDLDSFAGDLENLLDAEEFEEGEEGNNNNKVDKADAVKGLKMRRRPYKAQAEEEIED
EAAEAAELCRLLMDDEDDQKKKKKKKNKAVTEDAGLTFGLQPRIGVESLQRVKKTSIIPK
QIVRSTQSNGSYPMNENFVKDTKDIESRIFKGSVSGKLKGMKKNGMPSTGPLTKVKILGD
NVKLFKEKKSSRETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEP
SGQSQLKMMKKKLITKSATKIAVVEASEGEKSSTNTKALPLKFKCSTDRPSDKLTSGGTQ
SSDHPVTSDPENGAKSAAKVSKIIISNRAKPDEMQVESHKLPVVIRHQVDTDRGQAESHK
KSIVIKPPANMERDQVEPHKPSVVIRPPADKDKDQPQKKIIIKRPKEVIDLDQLSQEGGT
YPEYRKTKKIVELSSFEKHGKQESLRLMEPKARRKAKEERRWWEEEEKRRNVERIREDRA
RKLYEEEMRLLEERERFAEITRYTEDIRREREEEERQKAKKKKKKKAEIKEDYLEDYRTR
RNDRRAPERDRGAKRKPVELGRYGAEYVPPTKRRRGGEVGLANILERIVETLRDNTEVSY
LFLKPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGR
NPGIPPLADQLLELCDYLLHESSDSLAEAEAGIGEA
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgggtcactctagcttcccagatgaagatgacgatgaagaagaatacgaggaggaagct
ggtgggagtaatcggcttctgggttttatgtttggaaatgtcgataactccggtgatctt
gatgctgattatcttgatgacgatgcaaaggaacatctcgctgcggtagcagacaagctg
ggtccatctcttacagatatagatttgtcagaaaaatcaccgcacactccagctgatgcc
gctgaccaagattatgatgagaagtatgaaaatgctattgactatgaagatattgatgag
gagtatgaaggtccagagattcaagctgctactgaggaggaccatttacttcccaaaaag
gaatattttagtgctgatgtttcttctgctttggaacctaaagcctccgtgttcgatgat
gaaaattatgacgaggatgaggaaagtgaaaaagaacaagaggtggtagttgagcaggaa
gagcatcttgcagcaacagttgaagtggagaaatctcctgggcatgatgtacattgtggc
tcttcagacagtgaagatcaagtagatggtactgaagatcttcaggaggaacctgatgct
ccagaagagcctttggattctaaaagttccacacctctgcctgttttatgtgtagaagat
ggtatggtaatcttacggttttcagaaatatttggtattcatgagcccttgaagaaagcg
gccaaaagagaccgtggctatttcactcatagagagaagtacaaatctatggatgcttct
gatcttgttgaagaggatgaagaggcgtttctaaaggacgctggtcaaggtttctcattt
attggttgggaaaatgccatccaacaagatagatctgaatttacggatgacgctttggtg
aaaggaggcttggaaatttctgaacatagtgaagaacatgttaaggatagttattcaaat
ccagaggcaatgaaagagggggtagtagtaaatctttcttctgggttgcagtcaccttca
cgtccgaggttttttcctcttgatcagttggactgggaagaacaaattgtttgggacaat
tcacctgcaagaagtgacaattctttggagagtcctgaaatctgtgtctctgatttggag
gcgtcagtttcaagagagaccattccagagacggggcaaaatctactttctgagcagtct
acagaatcctatgagaaggaccatgatagtgggctttgtcattcctctattgtcttggaa
tcgtttgactcaaaaacttcttcaggacctatggacctgccattcttggaaagcagattc
catccccaactcttgaggctgggatcgcagttgagagtagattccttaaatgattctgat
ggtaaaacagatgttaccatggacccagataaaagtgatgtgatgaagtgttttagaaaa
cttacattgcaaaacaaagatataactgaagggtcatggttagacaatattatatgggaa
ccacatagtgttattgcaaagccgaagctaattcttgatcttcaagatgaacagatgctt
tttgaaattttagataacaatgaaagtaaacatcttcagcttcatgccggggccatggtc
attgctcgatctgcaaagccaagcagtcgttcttccgaggtctcggatcataaacatcaa
tctggttggcaattcaatattgctaatgataagttctacttgaaccgtaaagtttctcag
cagttacaatcaaatcctaataaacgcatggctcatggtgtcagagttcatcattcagca
cctgcacttaaacttcaaacaatgaagttgaagttgagcaataaagatttagcaaatttt
caccgcccaagagcaatatggtatccgcatgacatcgaggttgctgtcaggcaacaaggg
aggctgccaacacaaggacccatgaaagtcatattgaagagcttgggaggcaaaggtagc
aaactacatgttgatgctgaggaaacggtctcttctgtaaaagcaaagggttctaaaaag
ctagatttcaagccatcagaaacagtgaaaatattttatcttgggaaggagcttgaagac
gatatgtctcttgccgcccaaaatgttcctccaaattctctgcttcatcttattcgcaca
agaatacatttgtggccaagggcacaaaaacttccgcgagagaacaagtctttacggcct
cctggggcatttaagaaaaaatctgatctttctgtgaaagatggtcatgtctttcttatg
gagtactgtgaggagaggcctttacttttgagcaatgtggggatgggtgcaaacctgtgc
acctactatcagaaaacatcttcgggtgatcaaactagtggattgttacgcaatggaaac
gaaaccttgggaaatgttctgcttctagagccagctgataaatcaccttttattggagat
atcaaagctggctatagccagtcatctctagaaacaaacatgtacaaggctcccatattt
tcccacaaggtgccatcaactgacttcctattggttaggtcaccaaagggaaagctttcc
atacgacgtattgataggattgctgttgtaggacaacaggagcctctcatggaggtattt
gctcctggatcaaagaatattcagacatatcttatgaacagaatgctggtttatgtgtat
cgggagttttccgcatctgccaaacgtggtttgattccattcatgggtacagatgagttg
tttactcattttccgaacctttcagatgcaattgtccggaaaaagctgaaggaatgtgct
tatttgcggagggataaaaatggacgacagatttggtccatgaagccagatttccacatt
ccacctgaaggtgttcttaggaagttggtgtctccggagcatgtgtgtgcctatgaaagc
atgcaagctggcttgtatcggcttaaacatttaggaattacacgactaacaactcttacc
agtgtttcatctgcgatgagtcaactccctgatgaagctatagctctggctgctgcatca
cacattgaacgggagctgcagataactccatggaatctgagcagcaattttgttgcatgt
acaagccaggacagagataatattgagcgcctggagataactggtgttggtgatccttct
ggtcgaggtttaggatttagctatgtccgtactgctccaaaggctcctgtgtcaaatgct
gtgatgaagaagaaaacagcagctgctcgtggaggttctagtgtgactggtacggatgct
gacctccgcagattaagcatggaggcagcacgagaggtacttttgaagttcaatgttcct
gatgaagtgattgcaaaacaaactaggtggcatcgtattgcaatgatacgcaagctctca
agtgagcaagctgcatcaggagtcaaggttgatccaacaactataagcaagtatgcacgg
ggacagcgaatgtcctttcttcagttacaacagcagaccagagaaaaatgtcaggaaata
tgggatcgccaaattcagtctctttcagctgttgatggtgaagaaaatgaaagtgattct
gaggcaaatagtgatcttgattcctttgctggcgacctagaaaatttgcttgatgcagag
gaattcgaagaaggggaagaaggtaacaacaataacaaggttgacaaagcagatgctgtt
aaggggctcaagatgagaagacgtccctataaggctcaggcagaagaagaaattgaagat
gaggctgctgaagctgctgaattatgtcgtttactcatggatgatgaggatgaccaaaag
aagaaaaaaaagaagaaaaacaaagctgttacagaagatgctgggttgactttcggctta
caaccacgcattggtgttgagagtttacaacgtgttaagaaaacaagcataattcccaag
caaattgttcgttctactcaatctaatgggtcatatcctatgaatgagaattttgtcaag
gatacaaaggatattgaaagtagaatttttaaaggaagcgtgtctggaaagttgaaagga
atgaaaaaaaatggtatgccaagcacaggtccattaactaaagtcaaaatattgggagac
aatgtcaagttgttcaaggagaagaaatcatcgagagaaacttttgtctgtggagcttgt
ggtcagcttggacacatgaggaccaacaagcactgccccaagtatggagaagatccagaa
acgcaggttgaagctactgagttggaaaaaactcctgggaaatcaacttcgctagaaccc
tctggtcagtcccaattgaagatgatgaaaaagaagctcataactaaaagtgcgacaaag
atagcagttgtagaagcttcggagggtgaaaaatctagtacaaacacaaaagctcttccg
ttgaaattcaaatgctctactgataggccgtctgataaacttacttctggagggacacaa
agttctgaccatccagtcacttctgatccagaaaatggagccaagtctgctgccaaggtt
agtaaaataattatttccaacagggctaagcctgatgaaatgcaggttgagtctcataag
ctgcctgttgttatacggcatcaagtggataccgatagaggccaagctgaatcccataag
aaatctattgttataaagccaccagcaaacatggagagggaccaagttgaacctcataaa
ccctctgttgtcatacgcccaccagcagataaagataaggatcaacctcaaaaaaaaatt
ataatcaagcgaccgaaggaagttattgatttggatcaacttagtcaagagggaggcact
tatcctgaatacaggaaaacaaaaaaaatagttgaattgtcaagctttgagaagcatggg
aagcaggaaagcttgcgattaatggagccaaaagcaagacggaaagctaaagaggagaga
agatggtgggaagaggaagagaagaggagaaatgtggagagaataagagaagacagggca
aggaagctttatgaggaagaaatgagactgctggaagagcgagaaagatttgctgagatc
acaagatacactgaagacattcgaagagagagggaggaagaggaacgccaaaaagcaaag
aagaaaaagaagaaaaaggctgaaataaaagaggattatttagaagactacaggacaaga
agaaatgacagaagagcaccggaaagagatcgaggtgcaaaaaggaaacctgttgagtta
ggacgatatggtgcagagtatgtccctccaacaaagcggcgcagagggggagaggttggt
ttggccaacatcttagagcggattgtagaaacacttagagataataccgaggtgtcctat
ctgttcttaaaaccagtgtccaagaaggaggcccctgactacttgaacattgtaaagcac
ccaatggatttgtccacgataagggacaaggttaggcggatggaatacaaaaatcaagaa
gaatttaggcatgatgtatggcagattgcctacaacgctcatatctacaatgatggtcgt
aatcctggtattcctcctcttgccgatcagcttttggagctttgtgactacttgctacat
gagtcttctgatagcttggctgaagctgaagcaggtataggggaagcttaa
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integrated database retrieval system
