Gymnodraco acuticeps: 117542820
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Entry
117542820 CDS
T09661
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117542820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gacu04040
]
117542820
Ion channels [BR:
gacu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117542820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
MCLN_ECD
Motif
Other DBs
NCBI-GeneID:
117542820
NCBI-ProteinID:
XP_034066564
UniProt:
A0A6P8TQN0
LinkDB
All DBs
Position
Unknown
AA seq
1562 aa
AA seq
DB search
MFNWVVKVVPQLPSSEGTDNGVKTSAPRVKSPPQKNVEEDSQDSQNHTGVLGWLSNGFVS
AMPQPTGSPRLSRSDSERMGESEERSGVMGWVAQGLTKVLPQPDDKYKEIEDTQEHTEIY
EAATMPDFDPLPHIPVVEMESEDEEEPETPQFLPNVVNWIKQMVPQPLILPPGAVPLEQS
TKSSRSSLDKILSPPSESLSGISLDTDGKAPSMVGWFMTGLGLKIPQPAVQTKDDAQGVA
EVLKKASSKLRPDMVLEDVDSDNEAPQKHKDPATVAAPNPSVTTSSTNTQQTQSKPEPEP
EPDLTPSDSGTKSQEDAETQTGRWTPFIENIKKEAEGVAMASMEQRLLQERSEMVLIAEE
VARTTAENAIRQMASESIKLSLGSQDLLDEEDEEPDAELQDQQEEENEVDHQGTQKEQSI
SEEAEEPTIKEPEPKEQAKPQRSSPSPPPKPEPVKIQEPESEPESEPESEPESEPESEPE
SEPEPEPEPKTRETNSGAEPITQQPQRAKEDDQSNNADNAAEKEEATEDSCGAPVSCDAF
KSCLMRLPQTSECLGNINAFFKENGISIPKIPPMPNLPTQLSDVTNYLPSLPPELRQELS
QIRLTQVPRNIAQTLTELLPKNSDGSVGPDLSTLCLKMPKKQQQQQQQQQQQQQKQKQDK
NQHDVELNRLVRPSPLSPAHLRSPSPSPSSLNGSTLELPNVPSYPRLPPIVSPPSKQLNS
VSRQLSGLSNPAFFIEDDSDIPAIRPAESSSLSLRPAVNVEDVDSDHERGGEGGGGEGQS
YIPQILGPQDPKITTLTVPVTPSGCRQSKGDKDSGRSRRSIWTKIRTLHSQSEDDDEEGS
THVRAWPSQSSLHSSEDIMRERPASSASQTSTVVNERLQELVRMFKDRTEKAKEKLIDLD
SSDEDSIDPSPPQTSTAQPVVGGEKEEEAGPSGGGGGGGGVESGVEEQQSGRCCKVKAPR
WILACVHYRFPASIDPFTNLMYVLWMFLVSFAWNWNAWFIPVRWAFPYQTPDNIYYWLLT
DYLCDLIYILDMTIFQPRLQFVRGGDIVCDKKEMRKNYMKTKRFKFDLASLVPLEIFYFK
TGINPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLYCLHCNACLYYWGSA
YTGLGSTQWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTLFEIVFQLINYFVGVFAFSI
MIGQMRDVVGAATSGQTYYRTCMDNTIKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDEQ
ELLTQLPDKMRLDIAIDVNYSIVSKVALFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGE
VGREMYIIKAGEVQVVGGPDGRTVFVTLRAGSVFGEISLLAVGGGNRRTANVIAHGFANL
FILDKKDLNEILVHYPESKKLLRKKARKMLTKGKKPEPKEPKGPPQAPAAPVRPETPKLL
RAALEMAERSTGLKGALAKVKEKTNKSSVSLQPSVCSSLPPPSPSCSSGPDRDEDTPSPL
STSSATFRSASRCCNNNNNSAMPRSASQCHGDSEEMLTMDQGEESVSETEGNEGGKRKEK
KL
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggttccccaactcccgtcatctgaagggacggataac
ggtgtgaaaacatctgctcccagagtgaagagccctccacagaaaaacgtagaagaggat
tcacaggacagccagaaccacactggagttttaggctggctgtcaaatggcttcgtcagc
gccatgcctcagccgaccggctcccctcgactcagccggtccgactctgaaaggatgggg
gaaagtgaagaaaggtctggagtgatgggctgggtcgctcagggcctgacaaaggtgttg
cctcagcctgatgacaagtataaagagattgaggacactcaggagcacactgagatctac
gaggcagcaacaatgccagattttgatcccctccctcacattcctgtagtggagatggag
tcagaggatgaagaagagcctgagactcctcaatttcttcctaacgttgtgaactggata
aagcaaatggtccctcaaccccttatactgccccctggtgccgtacccttagaacaatca
accaagtcctcccgctcttctctggacaaaatcttgtctccaccatctgagtctctcagt
ggaatctcattggatactgatggcaaggccccaagtatggttggctggttcatgacaggc
ctgggcctgaagatccctcagcctgccgttcaaaccaaagatgatgctcagggtgtagct
gaagttttaaagaaagcttcatccaaactcaggcctgacatggtactagaagacgtggac
tcagacaacgaggcgccgcagaaacataaagatcctgccacagtcgcagcccctaaccca
tcagtgactacatcatcaacaaacacacagcagacacagtccaagccagagccagagcct
gagcctgatctaacaccttcagacagcgggacaaaatctcaagaagatgctgagacccag
acgggccgctggacgccgttcattgaaaacatcaagaaggaggccgaaggtgtagctatg
gcaagcatggagcaacgtctgctgcaggagcgctcagagatggtgcttatagctgaggag
gtggcaaggaccacagctgagaatgccattagacagatggccagtgagtccatcaaactc
tccctggggagtcaagacctcctggatgaggaggatgaggagcctgatgctgagttgcaa
gatcaacaagaagaggagaacgaagtggaccatcaaggaacacaaaaggagcagagcatt
tctgaggaggccgaggaaccgaccattaaggaaccagagccaaaggagcaagcgaagcca
cagcggtcgtccccctccccacctccaaaacctgaaccagttaagatccaagagcctgag
tcagagccagagtcggagccagagtcggagccagagtccgagccagagtccgagccagag
tccgagccagaaccagaaccagaaccaaagacccgggaaaccaactcaggagctgagccc
atcacccagcagccgcagagggcaaaggaagacgatcaaagcaacaacgctgacaacgct
gctgaaaaagaggaagctactgaggacagctgtggtgctccagtcagctgtgatgcattt
aagagctgcctgatgcgccttcctcaaacctccgagtgcctgggcaacatcaacgcgttc
ttcaaagagaacggcatctccattcccaaaataccccccatgcctaatctacccacccag
ctctctgacgttaccaactacttaccctccctcccccctgagttgcgccaagagctctcc
cagatccgactcacccaggtcccccgaaatatcgcccagactctgaccgagcttttgccc
aaaaactctgacggttcagtgggcccagatctgtccaccttatgcctcaagatgcctaag
aaacaacaacaacaacaacaacaacaacaacaacaacagcaaaaacagaagcaagacaag
aatcagcatgacgtggaactgaaccggctcgtccggccctcccctctctctcccgctcat
ctccggtccccctccccgtctccatcctccctcaacggcagcaccctcgaattgcccaat
gtgccatcctacccgcgcctgccgccaatcgtcagccccccctcaaagcagctcaactca
gtgtcccgccagctctcaggtctctctaacccggcgttcttcatagaagacgactcagac
attccagcaataagacctgcagaaagctctagcctcagccttcggccagctgtcaatgta
gaagatgtcgactccgaccatgagagaggaggtgaaggaggaggtggggagggtcagagc
tatatcccccaaatcctcggcccccaggaccccaaaatcacaaccctcactgtccctgtg
accccttcaggatgtcgccaaagcaaaggagacaaagacagtgggaggagtcgtaggagt
atatggactaagattaggacccttcactctcaaagtgaagatgatgatgaagaaggaagc
acccacgtcagagcctggcccagccagtccagcctgcacagctcagaagacataatgaga
gagcggccagcatcgtcagccagtcagaccagtacggtggtgaacgagcgtctccaggag
ctggtccggatgtttaaagacagaacggagaaggcgaaggagaaactcatagacctggac
agctctgatgaagacagcatcgacccctctcctcctcagacttcgactgctcagcctgtg
gtcggaggagagaaggaggaagaggcaggcccctcaggaggaggaggaggaggaggagga
gtggagagtggagtggaggagcagcagtctggccgctgctgcaaggtgaaagctcctcgg
tggatactcgcttgtgtgcactaccgcttccctgccagcatcgaccctttcaccaacttg
atgtacgtgctgtggatgtttttggtctcttttgcgtggaactggaacgcttggttcatc
ccggtgcgctgggccttcccctaccagacccccgacaacatttactactggctgctgacc
gactacctgtgtgacctcatctatatcctggacatgaccatcttccagccgcgcctgcag
ttcgtccgtggaggagacatagtgtgtgacaaaaaagagatgagaaagaattacatgaaa
accaaacgcttcaagtttgacttagccagccttgttcccctggagatcttctattttaaa
actggcatcaaccctctgcttcgtttaccccggttactgaagataaactccttctttgag
ttcaacgagcgtctagaggccatcttgaccaaagcctacatctacagggtgatccgcacc
accacctaccttctctactgtctccactgtaatgcctgcctgtactactggggctctgcc
tacacagggctgggctccacacagtgggtgtacaacggcaaaggcaacagttacattcgc
tgttactactttgctgtgaagaccctgatcaccattggtggtctgccggaccccaccacc
ctgttcgagattgtctttcaactcatcaactactttgttggagtctttgccttctcaatc
atgattggacagatgcgtgatgtggtcggtgcagccacttcaggtcagacttactaccgc
acatgtatggacaacaccattaaatacatgtcctcatatcgcatccccaaagacgtgcag
aaccgtgtcaaaacctggtacaactacacctggcaatcacaaggcatgctggatgagcag
gagctgctgactcagctgccagataaaatgcgtctggacatcgctatagatgtcaactac
tccatcgtcagcaaagtcgctctttttcagggttgtgacagacagatgatcttcgacatg
ctgaaaagccttcgctcagttgtctacctgcctggggattatgtctgcaaaaagggggag
gtgggtcgtgagatgtacatcataaaggcgggggaggtgcaggtggtcgggggaccggat
ggaaggaccgtgtttgtcactctcagagcgggatcagtcttcggggagatcagtttgctt
gcagtgggtgggggtaaccggcgcacagcaaatgttatcgctcatggatttgccaacctc
ttcatcctggacaagaaagacctgaatgagatcctggtgcactacccagagtccaagaaa
ctgctccgcaagaaggccaggaagatgcttaccaagggaaagaaacctgagcccaaagag
cctaaaggtccccctcaggccccggcagcccctgtaagaccggaaacccccaaactgctg
agagcagccctggagatggcagagagatccacaggacttaaaggggctctggctaaagtc
aaagagaagaccaacaagtccagtgtctcattacagccctccgtctgctcctccctgcct
cctccatctccctcctgcagctccggccctgacagagacgaggacacaccgtcacctctc
tccactagctctgctacatttcgctctgcctcccgttgctgcaacaacaacaacaactct
gcaatgcctcgctctgcgtcacagtgccacggcgattcggaggaaatgctcacaatggac
caaggagaggagagtgtgagcgaaactgaagggaacgagggtgggaagaggaaagaaaaa
aagttgtga
DBGET
integrated database retrieval system
