Gambusia affinis (western mosquitofish): 122819562
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Entry
122819562 CDS
T07758
Symbol
grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04020
Calcium signaling pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122819562 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122819562 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122819562 (grin3a)
Ion channels [BR:
gaf04040
]
Ligand-gated channels
Glutamate (ionotropic)
122819562 (grin3a)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2107
Motif
Other DBs
NCBI-GeneID:
122819562
NCBI-ProteinID:
XP_043952302
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Position
LG17:complement(17761895..17813386)
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AA seq
1243 aa
AA seq
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MTRSTRIMMVMDAPSARAGTGVSPSLCLLLCALLFLQPCAHSHPQPCQVLKRIGHTVRVG
ALHVQPRLVSTAPGSSSEDAEGALQRDQPLELGKPAKTGAGALGYGNLRTRAATNNHRGT
SKSKSQTKQRDGNPSKEDGLFSPRDSVLLAAEALNRAGLLPYNLSLEIVMAVGSALGELP
AFSYSSTGIPEDEDPLSFLESVCHTVVVQGISAMLAFPRNRDELVKLEFVSLALQVPVVS
VVQREFPRHSENRLHFQMAMQTVAAPPSQLLYYLLMMNGWWDFSIVLCQEWKINDFLVLI
KNNSRFHLGTLVNLTKTTLPPLLSSLSSSAEATTTPVGVEVLHSSYSSPTVSSYSSNSTL
KSDQQQGLMRQLEALREHSSTRGVVTFGCDIREVRRLWALATRMTLPEFHWVLGDSQNVA
ELRTDGLPLGLLAHGMMGSPSLEHYVQDSLEFVARAVGSAAQENPAMALIPGTTNCMDAQ
QSNGSSGEFLARFLANTSFEGQSGFISKESQSQNIISEAHHYIWSLQLDPLGQPTWTRLG
RWRRGRVLMDQGAWPNHQGSGSGGDWRRSARLHMRVVTLVEHPFVFTREVDGDGMCPAGQ
LCLDPLTNETSVLKGLFQKLAGHNGSVPTKLKKCCYGYCIDLLEKLAEDIGFTFDLYIVG
DGKYGGYKNGRWTGLVGDLLSGAAHLAVTSFSINSARSQVIDFTSPFFSTSLGILVRTRD
TAAPIGAFMWPLHWSMWLGIFVSLHVTAVFLTLYEWHSPFGMTPRGRNRNRVFSFSSALN
VCYAILFGRTVAIKPPKCWTGRLLMNLWAIFCLFCLSTYTANLAAVMVGEKTYEQLSGIH
DPKLHHPSQGFRFATVRESSAEDYVKKSFPEMHEYMRRYNVPATPDGIHHLKADPQKLDA
FIMDKALLDYEVSIDADCKTLTVGKPFAIEGYGIGLPQNSPLTSNFSELVSQYKSDGFMD
MLHDKWYKVVPCGKRSFAVTETLQMGIRHFSGLFVMLCVGVALSLLTTIAEHIVYKLVIP
RVKEPRSKYWLHTSQRLHRALNSVFTDDKLPTVTKPEKRCNEGNNQSASWNPAESSHCNR
RRFLPQDIQNDLEHPSPQDLPPPPSSHPHPPTLPLLEKHMPIVTTSNGRSDLLGRVLGQG
QEGSGQTTTQCCGLGVGDGSLGQVGRNPLVQELSELEGQITAIKLQLQSALRRKRELERY
QTENQQTNQTSPSQPSTHQSNQFCQYTQSHQQTNQHTNTLPDV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggtcgaccaggattatgatggtgatggatgccccgtcagcgcgagcaggcacc
ggggtctcgccgtctctgtgcctcctactgtgcgctctccttttcctccagccgtgcgct
cactcgcacccgcagccatgccaagtgctgaagcggatcggccacacggttcgggtggga
gctctgcacgttcagccccgcttagtatccacagctcctggcagcagttctgaagatgct
gagggagctttacagagagatcaaccgctggagttaggaaagccggctaaaacaggtgcc
ggtgcgcttggatatggaaacctcagaactagagccgccacaaacaatcatcggggcaca
agtaagagtaaaagccagacgaagcagcgagatgggaatccctcgaaggaggatggcttg
ttctcaccgcgggactcggtcctgctggcggctgaggctctgaaccgggccgggttgcta
ccttacaatttatccctggagattgttatggcagtcggatcggcgctgggcgagttgcca
gccttctcatactcctccacgggcattcctgaggacgaagacccgctgtctttcttggag
agcgtgtgtcacacggtggtcgtgcaggggatctccgctatgcttgccttcccgcggaac
cgggacgagctcgttaagttggaattcgtgtctctggcgctccaggtgccagttgtcagc
gtcgtgcagagggagttcccgcgccacagtgagaatcgtcttcattttcaaatggctatg
cagaccgtagcggcccctccatcccagctcctctactatctgctaatgatgaacggatgg
tgggacttcagcattgtcctctgtcaggagtggaaaataaacgacttcctcgtcctcatc
aagaacaacagccgcttccacttgggcacgctggtcaacttgacaaaaacaacattgccg
ccccttctgtcttcactatcatcctcggcagaggcaaccaccacccctgtgggagtggag
gtgctacactcatcatattcatcaccaactgtatcatcttattcatcaaattctactttg
aaatcagaccagcagcagggtctcatgaggcagctggaggccttaagagaacattcctcc
acacggggagtggtgacgtttgggtgcgacattcgggaagttcgccgattatgggcgctg
gcgactcgaatgaccctcccagagtttcactgggttttaggggacagccaaaatgtggct
gagcttagaacagatgggttaccactggggctacttgcacatggcatgatgggatcccct
tctttggaacattatgttcaggactcgctggagtttgtagcacgagccgtgggcagtgca
gcccaggagaatcctgccatggcgcttatacctggaactacaaactgtatggatgcacaa
cagagtaatggcagttcaggggaattcttggcaagatttctggccaacacgtcatttgag
ggccaaagtggttttatatccaaagaaagccaaagtcagaatatcatctcagaggcccat
cactacatctggtctctccagctggaccctcttggccagccaacctggacccgtctggga
cgctggcgcagagggagagttctaatggaccagggggcttggccaaaccatcaagggtct
ggtagcggaggagactggcgccgatctgcgcggttgcacatgcgagtggtgaccctggtg
gagcatccctttgtgtttacccgtgaggtggatggagatgggatgtgtccagcgggccag
ctgtgcttggacccgcttaccaatgagacctcggttttgaaaggacttttccagaaactt
gcaggacacaatggatctgttcctacaaaactgaagaaatgttgctatggttactgcatt
gacctgctggaaaagctggcggaggatattggctttacttttgacctatatattgttggt
gatgggaagtatggagggtacaagaatgggcgttggacaggactggtaggcgatctacta
agtggtgctgcccacctggcagtgacatcattcagcattaattcagccagaagtcaagtc
attgactttacatcaccctttttctctaccagcctggggattctggttcgtacccgtgac
acagctgcacccattggcgccttcatgtggcccctccattggtccatgtggcttggcatc
ttcgtctccctccacgtcaccgctgttttcctcaccctatacgagtggcacagccccttt
ggaatgacccctcgtggacgcaatcgtaaccgcgtcttctctttctcctcggcccttaac
gtgtgctatgctattctctttgggagaacagtagccatcaaaccccccaagtgctggact
ggtcgcctgctgatgaacctttgggcaatcttttgcctcttctgtctgtccacctacact
gctaacttggctgcggtcatggttggggagaaaacctatgagcagctgtcagggatacat
gatccaaagttgcaccatccctctcagggattccgctttgctacagtgagagaaagcagt
gcagaggactacgtcaagaagagtttccctgagatgcatgagtatatgagaagatacaat
gttccagcaacaccagatggcattcatcatctaaaggctgaccctcagaaactggatgcg
ttcattatggataaagctctgctggactatgaggtttctatagatgccgactgtaaaaca
ctcacagtggggaaaccttttgccatagaaggatacggcataggcctccctcagaactcg
ccgctgacctccaacttctcagagcttgttagtcagtacaaatccgacgggttcatggac
atgctgcatgacaaatggtacaaggttgtgccctgcggaaagcgcagctttgctgtgact
gagacactgcagatgggcataaggcatttctctggtctgtttgtgatgctgtgtgtaggc
gtggccttatctcttctgaccacgatagcggaacacattgtgtacaagctagtgatcccg
agggtcaaggagccacgctccaaatactggctgcacactagtcagaggttacacagagcc
cttaattctgtcttcaccgatgacaaactaccaactgttaccaagcctgaaaaaaggtgc
aatgaaggaaacaaccagtcagcatcttggaatcctgcagaatcctcccactgcaaccgg
cgaaggtttcttccgcaagatattcagaatgacttggaacatccatccccccaggatctt
ccacctccaccttcttcccaccctcatcctcctacacttccattgctggagaaacatatg
cccatagtgaccacctctaacggccgctctgacctgttaggacgtgttttgggccaagga
caagaaggatctggacagactacaacgcaatgttgcggcttaggagtgggtgatggtagt
cttggccaagttggtcgaaacccactagtgcaagaactgtcagaacttgagggtcaaatc
actgcaatcaagctgcagctacagtcagcactgagaaggaagagagagcttgaacggtac
caaacagaaaaccagcaaacaaaccagacttcaccaagtcagccctcaacacaccagtcc
aaccagttttgccagtatactcagtcccaccagcagactaaccaacacacaaacacactc
ccagatgtctga
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