Gambusia affinis (western mosquitofish): 122820130 Help Entry 122820130         CDS       T07758                                  Symbol capn1 Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism gaf  Gambusia affinis (western mosquitofish) Pathway gaf04141   Protein processing in endoplasmic reticulum gaf04210   Apoptosis gaf04217   Necroptosis gaf04218   Cellular senescence gaf04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:gaf00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     122820130 (capn1)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     122820130 (capn1)    04217 Necroptosis     122820130 (capn1)    04218 Cellular senescence     122820130 (capn1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     122820130 (capn1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:gaf01002]     122820130 (capn1) Enzymes [BR:gaf01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      122820130 (capn1) Peptidases and inhibitors [BR:gaf01002]  Cysteine peptidases   Family C2: calpain family    122820130 (capn1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_5 EF-hand_7 CAPN13-like_C_EFh Motif Other DBs NCBI-GeneID:  122820130 NCBI-ProteinID:  XP_043953245 LinkDB All DBs Position LG18:complement(9452358..9489336) Genome browser AA seq 706 aa AA seqDB search MVEAPIYATGMAAKLRSQWDRDGGLGQNDNAVKFLGQDYESLKAQCLRSGTLFEDSLFPC VTSSLGFNELGPRSSKTSGVRWMRPSELCRRPEFIVDGATRTDICQGSLGDCWLLAAIAS LTLNDNLLHRVVPHGQSFQQGYAGIFHFQFWQFGEWMEVVIDDRLPVKDGKLLFVHSAEG TEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELKNAPSDLFSIIGRAVE RGSLLGCSIDITSSGDMEAVTFKKLVKGHAYSVTAVEEVMYRGSPTKLVRIRNPWGEVEW TGAWSDNAREWDSVDGSVKSRLLNRSEDGEFWMSFTDFLREFNRLEICNLTADALQDGQM KKWNTSLFGGEWRRGSTAGGCRNFPATFWLNPQYKIKLQHPDAPGKPDCSFLVALMQKDR RKKRKEGKDMETIGFALYEVPKEFVGSSGVHLKRDFFLTHASSARSEQFINLREVSSRLR LPIGEYIIVPSTFEPNNEGDFVLRVFSEKPAGSEELDDKVVANIPPETKVDESQIDASFK NLFRQLAGNDMEISLTELQTILNRIISKHKDLKTDGFSKEACRSMINLMDADGSGKLGLT EFHVLWEKIKRYLTIFRQFDLDKSGTMNSYEMRMALESAGFKLNNHLFQLIILRYTEEDL SIDFDNFVTCLVRLETMFKTFKNMDTDGDGQISLNFFQWVTLTMFA NT seq 2121 nt NT seq  +upstreamnt  +downstreamnt atggtggaggcccccatttatgccacaggcatggccgccaagctcaggagtcagtgggat cgcgacggcggcctcggacagaacgacaacgcggtgaagtttctgggtcaggactacgag tctctgaaagcgcagtgcctccggagcgggacgctgttcgaggacagtttgttcccctgc gtcacgtcgtctctgggattcaacgagctcggccccagatcctccaagaccagcggcgtc cgctggatgaggccctcggagttgtgcaggcggccagagtttattgtggacggagcgact cgcacagacatctgtcagggatccctgggagactgctggctgctggcggccatcgcctcg ctgacgctgaacgataacctcctccacagggtggttcctcatggacagagctttcagcag ggttacgctggcatctttcactttcagttctggcagtttggagagtggatggaggtggtg attgatgaccgtctcccagtgaaagatgggaagttactgtttgtccactccgcagagggg actgaattctggagcgctctgctggaaaaggcctacgccaagctgaacggctgttatgag gctctgtcgggcggcagcacgtcagagggctttgaggacttcaccggaggcgtgacagag atgtttgagctgaagaacgccccctcagacctcttcagcatcatcggccgagccgtggag agaggatccctgctcggctgctccatcgacatcaccagctcaggagacatggaggccgtc acattcaagaagctggtgaagggccacgcctactccgtgactgctgtggaggaggtgatg tacagaggaagcccgaccaagctggtccgcatcaggaacccctggggggaggtggaatgg accggggcctggagtgacaacgccagagaatgggactcggtggacggctccgtcaaaagt cggcttctgaaccgcagtgaagacggagagttctggatgtccttcactgacttcctgcgg gagttcaaccgtctggagatctgcaacctgacggcggacgccctgcaggacggccagatg aagaagtggaacacgtcgctcttcgggggcgagtggaggagaggcagcaccgctggaggc tgcaggaacttcccagccacgttttggctgaatcctcagtataagatcaagctgcagcac cccgacgcccccggcaaaccagactgcagctttttggtggcgctcatgcaaaaggaccgc aggaagaaaagaaaagagggcaaagacatggagaccattgggtttgctctctatgaggtt ccaaaagagttcgtggggagctcgggggtccacctgaagcgagacttcttcctcacgcac gcctccagcgctcgctcggagcagttcatcaacctgagggaggtcagctcacgcctgcgg ttgcccatcggggagtacatcatcgtcccctccacctttgagcccaacaatgagggcgac tttgtcctgagagtcttctccgagaaacctgccggctctgaggagcttgatgacaaagtg gttgcaaatattcccccggagactaaagtcgatgagagccagattgacgccagcttcaag aatctcttcaggcagctggccggcaacgacatggagatcagcctgactgagcttcagacg atactgaacaggatcattagcaaacataaggacctgaaaacagacggcttctctaaagaa gcttgccgcagtatgataaacctcatggacgcggacgggagcgggaagctgggcctgacc gagttccacgtcctgtgggagaagatcaaacgatacctgaccatattcagacagtttgat ttggacaaatcgggcaccatgaactcctatgagatgcggatggcccttgagtctgcaggc ttcaagctgaacaaccatctgttccagctgatcatcctgcggtacacagaggaggacctg tccatcgactttgacaactttgtcacctgtttggtccgactggagacgatgttcaaaaca tttaaaaacatggacacggatggagacggtcaaatatccctcaacttctttcagtgggtt actctgaccatgttcgcctag

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