Gambusia affinis (western mosquitofish): 122820345
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Entry
122820345 CDS
T07758
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf02010
ABC transporters
gaf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122820345
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122820345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gaf02000
]
122820345
Transporters [BR:
gaf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122820345
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
122820345
NCBI-ProteinID:
XP_043953626
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All DBs
Position
LG18:complement(14267763..14460120)
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AA seq
2251 aa
AA seq
DB search
MGLLTQFSLLLWKNFTLRKRQKVRLVVELLWPLFLFFILVGVRATNKPIHKGQCHYPNKA
MPSAGVLPWLQGIICNIDNPCLDHPTPGETPGQVNNFNNSIIAGMLIELQSVLADRSALS
KMQLLVDDVDQWTSVLSKAEPGKGNRTVILRSILQDNETFSAHLTEGLSVPPDVVQSLMD
AKIHLSSTTGIPRLDNVRSILCEGTDLDDYVQFSSQAEREAFQNVSCSLSQQQLIKTQQV
LLQNMDVRKVLPELLSAADLNPVDTEALMRKTSAESLPLIMNVVRLRNSMNFKAAESLDF
REDMFGSVNMLLCGKQPNYNFTKMTSSFPSPTQMANNMSTSSMGNSSDAFCQILVDTLEG
TPGLRYIWSTFKPLLQGKVLYAPDTPAARLLVKEANSTFNSLAMLKELADSWNELGPRVW
DFLQNSPQVNTLRALVANPIFAAALNQRLVGSGWTAEQLENFLYNGAPEDRPRGMPPYDW
RDVYNSTTEILKFLSNFLNCLDLNKFEAAATETHLVNKALEHLKNDTFWAGVVFANLHPN
SSHIPPYVKYKIRMDIEEVERTNKVKSRSWSPGARDNSFNDLRYIWGGFAYLQDMIDHAV
IRLQTSKSQPLGVFVQQIPYPCFVDDAFIQSIGAILPMFLVLAFMYSVCMTIKSLVLEKE
LRLKEVLRAVGVQNGALWSARFTENIVLLTVPCVLISVMLKYGKVLQYSDPSVIFVFLLV
FCLATISQCFLISVFFSKANLAAACGGLIFFLLYLPHSLCYAWRDVMGFGAKVAVSLLSC
VAFGYGCENFSQYEEQGIGIQWHNIIRSPQEGDQYTFIVSIAMMLVDAVLYWVLTWYIEN
VFPGQYGIPKPWYFLFTSSYWCGMTPGAENIPDLLTDSGAHIGYFERPPPSVKAGVSIRN
LVKIYKTGKKLAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALIHGYD
IRTDIDSIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGRSRREVDSEIDQMIKDVGLPH
KRKDLAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTI
ILSTHHMDEADILGDRIAIISQGKMRCCGSSLFLKKCFGSGYYLTLVRDETEKMTNQHKN
ITQSLSKEEHMETARPSMDSPDDGFGSQTWDNSDRTADLAAVSQLVRHHVPEAVFLESIG
QEITFILPYSGARDGTFATLFHKLDLAMADLGLTSYGISDTTLEEIFLKVAEETGVDTEM
PSAKEPLVRDWKRSSRESKRNSVASIRAKSEHNGMRDVKEKFLNKVEDYKKSTSLNGRGS
TVITGWKLIRTQFLALFIKRFHHARRSRKGLIAQVVLPAFFVCLSLIFSLIVPPFREYPS
LELQPWMYSLPQTTFYSNDMSENLEVSKVTETLLNNPGFGTRCMHGDPIPGLPCSPTYSD
WTIPSVDQSIKDIFLNGNWSMANPSPSCQCSTPKRTIMLPDCPPGAGGLPPPQRVQNTTE
TLLDLTGRNITDFLIKTFEDFGKKRYGGISVGAVNSQVRLTEAEVEDVFRGLKNLLNSSQ
DNVTDQTLQRAEMVLKKLGTRHNVKVWFYNQAWHGMVSFLSVANNGILRGNLPKGEDPRH
HGISISNHPLNLTKEQLSSAAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKH
LQFVSGVNPTVYWLTNFVWDMCNYIVPCFIVIVIFLCFQQKAYVSPPNLPALILLLIFYG
WAITPMMYPASFVFSVPSTAYVVLTCINLFIGINGSVATFIMELIDDDNISHINDIVKQV
LLIFPHFCLGRGLIDMAKNQAMATLFINFGEDRFKDPLSWEMVGKNLLAMSIQGAVMFIT
TILIQYKFFCKPRLISPKQAATEEEDVDVARERQRVYEGRAQNDLLRICDLTKVYPGKST
PAVDRLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMGLVHQ
NMGYCPQFDAIDDLLTGQEHLEFYARLRGVPEGEVAMVAEWGIQKLGLIKYANKSAGTYS
GGNKRKLSTAMALIGCPPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEE
CEALCTRMAIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALQPVEEFVQLTFPES
ILKEKHHNTLQYQLPYTQGALANIFSQFTSNQQRLGVEDYSVSQTTLDQVFVNFARHQHG
EDDSRAYSNPVDVTDELPLRSLQASREAENA
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttctctctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggttgtggagctgctctggcctctgtttctcttcttcatactagtg
ggggtgagggctaccaataagccaattcacaaaggccaatgccactacccaaacaaagcc
atgccatctgctggcgttctgccctggcttcaaggaattatatgcaacatcgacaatcca
tgtttggaccacccaacgccaggggagacaccaggccaagtgaataacttcaacaactcc
ataattgctgggatgttgattgagctgcagtctgtgctggcagacaggtcggctctcagt
aagatgcagttgctggtagatgatgttgaccagtggacttcagtgctgtctaaagcggaa
cctggaaaagggaatcggactgtgatcctaagaagtatcctacaagacaatgaaacattc
agcgcccatctgacagagggtttgtcagttccaccagatgtagttcaaagcctcatggat
gcgaagattcaccttagttcaacgacgggcatcccaaggcttgacaatgtgaggagcatc
ttgtgtgaggggacagatctggatgactatgtccaatttagcagccaagctgagagggag
gcttttcaaaatgtcagctgctccctcagtcaacagcaactgattaaaactcagcaagtc
cttctacaaaacatggatgtgaggaaagtgcttccagagctcctttcagctgcggacctg
aatccagtggacacagaggcactaatgagaaaaaccagtgcagaatcactgcctttgatc
atgaatgtggtcaggctgcgaaactccatgaactttaaggcagcagagtccctggatttt
cgggaggacatgtttgggagcgtcaacatgctgctctgtgggaagcagcctaactacaac
ttcaccaagatgacctccagttttccttcacctacacagatggctaacaatatgtcaact
tccagcatgggcaacagttccgatgccttttgtcagattcttgtcgacaccctggagggc
acacctggtctgcgctacatttggagcaccttcaagccattattgcaagggaaggtcctc
tatgcacctgatacacctgctgctcgcctccttgtgaaggaagcaaacagcactttcaac
tctcttgccatgttaaaggagctggcagattcttggaatgaacttggcccacgtgtctgg
gattttctgcagaatagccctcaagtcaacacgttgcgggctctggtggcaaatcccata
tttgcagctgccctcaaccagcgcctcgttgggtcaggatggacagccgagcagctggag
aacttcctgtacaatggcgctccagaagaccgtccacgcggcatgccaccctacgactgg
cgggatgtttacaactccaccactgaaatcctgaagttcctctccaatttcctgaattgt
cttgatctgaataagtttgaagcagctgcgacagaaacccatctggtgaacaaagccttg
gagcatctgaaaaatgacacattctgggctggagttgtctttgcgaacctccatccaaac
tcaagtcacatccctccttatgtgaagtacaaaatccggatggacattgaggaggtggag
cgcaccaacaaggtgaaatcaaggtcatggtctcctggagccagggacaattcctttaac
gacctgcgctacatctggggaggctttgcctacctgcaggacatgatcgaccacgcagtt
atacgactgcaaacatcaaagtctcagccgcttggtgtcttcgtccagcaaatcccatac
ccttgctttgttgatgatgcctttatccagagtattggagcaattctacccatgttcctg
gtgctggccttcatgtactctgtgtgcatgaccatcaaaagcctggtgctggagaaggag
ctgcggcttaaggaggtcctgcgggccgttggtgttcaaaacggcgcactctggtccgcc
aggttcacagagaacattgttctgctcacagttccatgtgtgctcataagtgtcatgctc
aagtacgggaaagtcctgcagtacagcgacccctcagtgatctttgtcttcttgctggtc
ttctgtttggccaccatctcccagtgcttcctcattagcgtcttcttctctaaggccaat
ttagcggcggcgtgtggcggcctcatcttctttctcctctacctgccacacagcctctgc
tacgcctggagggacgtcatgggtttcggggccaaggtggctgtgagtttactgtcatgt
gttgcctttggttatgggtgcgagaacttttcccaatatgaggagcaaggcatcggtata
cagtggcacaacattatcaggagtccccaggagggggatcaatacaccttcattgtctcc
atcgccatgatgctcgttgacgccgtcttatactgggtgctaacatggtacattgaaaat
gtcttcccaggtcagtatgggattccgaagccatggtacttcctgttcacttcctcttac
tggtgtggaatgacaccaggagctgaaaacatccccgatctgctgacagactctggggca
cacattggatattttgaaagaccgcctcccagtgtgaaagcgggagtgtcgattcgcaat
cttgtcaaaatctacaagactgggaagaaactggcggtggacggcctgagcgtggacttc
tacgagaatcagatcacatcatttttgggccacaatggagctggaaaaacaaccacaatg
tctattctgacagggctgttcccacctacatcaggaacagccctcatccatggatacgac
atccgcaccgacatagacagcattaggaagtatttgggaatgtgtccgcagcataatgtt
ctatttaatgaactcactgtggaggagcacatctacttctacgccaggttgaagggacgt
agtcgcagggaggttgactctgagatagaccagatgattaaagatgttggtttaccacac
aagcgtaaggatcttgctaagaacctatcaggtggaatgcagcgaaaactctctgtggca
atagcctttgttggcggttcaaagattgtcatcctagatgaaccgacagcaggagtagac
ccttacgctcgccgggggatttgggaactactgctaaagtacaaacaaggccgcaccatt
attttgtcaacacaccatatggacgaggcagacatcttaggagaccgcatagccatcatc
tctcaaggaaagatgcgatgctgcggctcctcgctcttcctgaagaagtgtttcggcagt
ggctactacctgactctggtcagagatgagacggaaaagatgaccaatcaacataaaaat
atcacacaaagtctgtccaaggaggaacatatggagacagcccgtccttccatggatagt
ccagatgacggcttcggcagtcaaacatgggacaattctgaccgtacagcagatcttgct
gccgtgtctcagcttgtgcgccaccatgtaccagaagctgtgtttttggagagcatcggt
caggagatcaccttcatcctgccctacagtggagccagagacgggaccttcgccacactc
ttccacaagcttgatcttgcaatggctgaccttggcctgaccagctatggcatctctgac
accacactggaggagatatttctgaaagtggcagaagaaaccggcgtggatacagaaatg
ccatcagcaaaggagccattggttagagactggaaaagaagctcccgcgaatctaaaaga
aacagcgttgccagcatccgcgccaaatcagagcacaacgggatgagagatgttaaagaa
aaatttttaaataaagttgaagattataagaaaagtaccagcctgaatggaagaggatcc
acggtcatcaccggttggaaactgatcagaacgcagtttctggctctcttcatcaagcgc
ttccaccacgcccggaggagccgcaagggactcattgcgcaggtggtcttgcctgctttc
ttcgtgtgcctatctctgatcttctccctcatcgttccaccattcagagaatatccaagt
ctggagctgcagccatggatgtacagtcttccccaaaccacattttatagcaatgacatg
tctgaaaatctggaggtgtcaaaggtgacagaaactttactgaacaaccctggttttggg
acacgttgtatgcatggagatccgataccaggtttaccgtgttcgccaacttactctgat
tggaccattccatctgtggatcagtcaatcaaagacatcttcctcaacgggaactggagc
atggctaacccttctccttcctgccaatgcagcactcctaaacggacgattatgttaccc
gactgtccacccggagcgggaggtctccctccaccacagagagtacagaacacaacagaa
actctgctggatttaactggacggaacataacagactttttgatcaagacttttgaggac
ttcggaaaaaaaaggtatggaggcatttctgtgggagcagtaaactcacaagtccgtcta
actgaggcagaggtcgaggatgtcttcaggggtttgaaaaatcttttgaactcatctcag
gataacgtcactgatcagaccctgcagagagccgagatggtgctgaagaagcttggaact
aggcacaatgtcaaggtgtggttctacaatcaggcttggcatgggatggtgtccttcctt
agtgtggccaacaacggcatcctgagaggaaatcttcctaagggagaggatccacgccac
catggcatctccatttctaatcaccccctaaatctcaccaaggagcagctctcctcagca
gccatggcgacgacctctacagacgtggtggtgtccatctgtgttattttcgccatgtcc
ttcatccctgccagctttgtcctcttcctaatccaggagagggtgagcaaagccaagcat
ctgcaatttgtcagcggtgtaaacccgaccgtctactggttaaccaatttcgtctgggat
atgtgtaactacatcgtgccctgtttcatcgtgattgtgatcttcctctgttttcaacaa
aaagcctacgtttcacctccgaatctgcccgctttgatattgctgctaattttttatgga
tgggccatcacacccatgatgtacccagcctccttcgtcttcagcgttcccagcacagct
tacgtggtgttgacctgcatcaacctcttcattggcatcaacggcagtgtggccaccttc
atcatggagctcattgatgatgataacatatcccacattaatgacatagtgaagcaggtg
cttctgatattcccacatttctgtctgggcagaggtcttattgacatggccaagaaccag
gcaatggcaacacttttcatcaattttggggaagatcgttttaaggatccactgagctgg
gagatggtgggaaaaaatctccttgccatgtctattcaaggagctgtgatgttcatcact
accattctcatccagtacaagttcttctgcaaaccgaggcttatatcaccaaagcaggcg
gctacagaggaggaggacgttgacgttgcccgggaacgccagagagtgtatgaaggcaga
gctcagaatgacctgttgaggatctgtgacctcacaaaggtataccctgggaagagcacc
cctgctgtggaccggctatgcgtgggcgtgcctgctgcagagtgtttcggcttgctgggg
atcaacggcgctgggaaaaccacgacattcaagatgctgacgggagacatcccagtctcc
agcggagaggcctttctaaacggatacagcatacggacagaaatgggacttgttcaccag
aacatgggttactgtccccagtttgacgccattgatgaccttttgactggacaagagcat
ctggagttttacgctcggttaagaggggtaccagaaggagaggttgccatggtggccgag
tgggggattcagaagttggggctgatcaagtacgccaacaagtcagcaggaacctacagc
ggtgggaacaaacgtaaactatccacagcgatggccttgatcgggtgtccgcccgtggtt
ttcttggatgagccaaccaccgggatggaccccaaagccagacgcttcctttgggactgc
atcctgagtgtcatcaaagagggacgctcagtcattctcacatcgcacagcatggaggag
tgtgaagcactgtgcactcgcatggccatcatggtaaacggtcgcttcaaatgccttgga
agcatccagcatctgaaaagcagatttggcgatggctacacggtgattgtgcgtgtcggc
ggctcccctcctgccctccaaccagttgaggagtttgtccagctgactttcccagaaagc
atcctaaaggagaaacaccacaacacactccagtaccaactcccatacacacagggagct
ttggccaacatcttcagccagttcaccagtaaccagcagaggctgggcgtggaggactac
tctgtgtcccagacaactctggatcaggtctttgtgaactttgcacgccaccagcatggg
gaggacgactctcgggcctacagcaacccagtcgacgtcacagacgagctgccactgagg
tcgctgcaggcctcccgagaagcggagaacgcctaa
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integrated database retrieval system
