Gambusia affinis (western mosquitofish): 122823653
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Entry
122823653 CDS
T07758
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122823653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122823653
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122823653
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
122823653
NCBI-ProteinID:
XP_043959443
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All DBs
Position
LG02:complement(723772..780103)
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AA seq
1203 aa
AA seq
DB search
MMLSWVVKVVPQPPELPSKNTEDAKEEKPEAAPPPDVAPPPAPEKKVTFEDESKKDAAKA
DKLNQEVEASAGNGPGPGMLTWISSALPLPAPLANQNRANSTPKEEAAASKPDDEKGMMA
WISQGLEKVVPQPELRSRESPAAEQVQQAAAPAEAQSAGKELEPVDQSSPPSMMDWIKHG
IVKVVPHPESLPKAEGTSKSEAPSKAPPAVPPPATRPIPVTEPAKEAEQQPNMVGWIVSG
IGRMLPQPVPRPETGSDDMQNISGTQKMSDLVLEDLEEAQQEVPTVKEVDVAEPLTPMDG
VKKEAGDGAHMEERLQRLEAARVAEEMARQAAAEAVRQLEVERSARIVIETLPESNDQLP
NILEEENEDEPECLVDVCPAEEKQVEALAPPTAPEPADQVTPSSTDVEPASERRDLESPI
TQQPEPHLEEAPAHTAEQSEAAAGEEEAGESGGSCRNADAPALMLQAADPDELHRLNLSI
PQIITTPEPEPSTLMVPQLRADPTAGQEDEELLKARSGQGDDEMRPQSAASVASVTVQER
LNQLVGLFKGRTERHKDRLADPDESEEESPTASPAKAPPAPPPPPPGEEKKDEPDPPQEA
GLFQFELLGHPVQLPKLPPMPDWLRSVLEYRFPSSIDPFTDLIYVIWLFFVVAAWNWNVW
LIPVRWAFPYQTPDNIHLWLLADYACDFIYIADILVFQPRLQFVRGGDIVCDKKDMREHY
MTTERFKMDVLSLFPMEILYYFTGVNSLLRFPRLLKYVVFFEFNDRMEAVMKKAYIYRVI
RTSTYLLYSLHINACLFYWGSDYEGLGSTKWVYDGKGNAYIRCYYFAVKTLITIGGLPDP
TTVFEICFQLINYFVGVFAFSIMIGQMRDVVGAATAGENYYRACMDSTVKYMNSYSIPQE
VQNRIKTWYDYTWKSQGMLDEQELLIQLPTKMRLDIAVDVNYSIVSKVALFQGCDRQMVF
DLLTRLKSVVYLPGDFVCKKGEIGREMYIIKQGEVQVVGGPDLETVFVTIRAGSVFGEIS
LLAGGGGNRRTANVKAHGFANLFILDKKDLAEILVHYPESQKLLRKKAKTMLTKDKKPEE
KETRKEAAEVIPPRPDTPKLFKAALKVTERAGIEGTFAKMKKVYQPAEGQTEAPPPISPV
PPPSPMHRRSPVPRSAPEDMDESVAETADSSVIIRMTPRQEGEELLTVEVLEEGAKREKE
EEG
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgagctgggtggttaaagtcgtcccccagccgcctgaacttccatccaaaaac
actgaagatgccaaggaagaaaaaccagaagcggccccgccccctgatgtggccccgccc
cctgcaccagagaagaaggtgacgtttgaagatgagagcaagaaggacgctgcaaaagct
gacaaactgaatcaggaagttgaggcgtctgcagggaacggtccgggtccaggcatgctg
acctggatcagcagtgctctccctctgccggcgccgttggccaaccagaaccgggccaac
tccacccccaaggaggaagcagcagccagcaagcctgacgatgagaaagggatgatggcc
tggatctctcagggtttggagaaagttgttcctcagcctgaactgaggagcagagagtct
ccggcggccgagcaggtgcagcaagcagcagctccagcagaagctcagagtgccgggaag
gagctggagccggtggaccagagctctccacccagcatgatggactggatcaaacacggc
attgtgaaggtggttcctcatccggagagcctcccaaaggctgaaggaaccagcaagtct
gaagctccgtctaaagcgccccctgcagttcctcctccggccaccagacccattccggtg
acagaacctgcaaaggaagcagagcagcagccaaacatggtgggttggatcgtcagtggg
atcggccgcatgctgccgcagcccgtccccaggccggaaacaggaagtgatgacatgcag
aacatcagcggcactcagaagatgagtgacttggtgctggaggacctggaagaggcgcag
caggaggtgccgactgtgaaggaggtggacgttgccgagccgctgactccgatggacggc
gtgaagaaggaagcaggcgacggcgctcacatggaggaaaggctgcagcggctggaggcg
gcccgcgtcgccgaggagatggcccggcaggcggcggcagaggcggtccggcagctggag
gtggagcgttcggccaggatcgtcatagaaacgctgccggagtccaacgaccagctgccc
aacatcctggaggaggagaacgaggacgaaccggagtgtctggtggacgtctgcccagct
gaagagaagcaggtggaggctctggccccgcccactgcacctgagccagcagaccaggtg
actccttcgtccactgatgtggagccggcatcagagcggagagatctggagagtcccata
acccaacaaccagaaccgcaccttgaagaggcccctgcccacactgcagagcagagcgaa
gcagcagcaggagaagaagaggcaggagaatctggaggaagctgcaggaacgctgacgct
ccggcgctgatgctgcaggctgcagatccggacgagctgcacagactcaacctgagcatc
ccgcagataatcacaaccccagaaccggagcccagcacactgatggtgcctcagctcaga
gccgacccgacggcaggccaggaggacgaggagctgctgaaggcccggtccggtcaggga
gacgacgagatgcggccgcagtccgccgccagcgtggccagcgtcacggtccaggaacgc
ctcaaccagctggtcgggctcttcaagggccggacggagcggcacaaagaccgcctggcg
gatcccgacgagtccgaggaggagagccccactgcctctcctgctaaagctccgccggct
cctccgccgcctccgcctggagaggagaagaaggacgaaccggacccgccacaggaggcg
ggtctgttccagtttgaactcctgggacatccagtccagctgcccaaacttcccccgatg
cccgactggctgcggtccgtcctggagtaccgcttcccgtccagcattgatccattcact
gacctcatctatgtgatctggctgttcttcgtggtggcggcctggaactggaacgtgtgg
ctgatcccggtgcgctgggcgttcccctaccagacgccggacaacatccacctgtggctg
ctggccgactacgcctgcgacttcatctacatcgcagacatcctggtcttccagccgcgg
ctgcagttcgtccgcggcggagacatcgtgtgtgacaagaaggacatgagggagcattac
atgaccacggagcggttcaagatggacgtcctcagcctgttccccatggagatactttac
tacttcacaggagtgaactccctgctgcgcttcccccgcctgctgaagtacgtggttttc
tttgagttcaacgaccggatggaggccgtgatgaagaaggcctacatctacagggtgatc
cggacctccacctacctgctctactcgctgcacatcaacgcctgtctcttctactggggc
tccgactacgagggtctgggatcgaccaagtgggtctacgacgggaaaggcaacgcttac
atccgatgttactactttgctgtgaagacgctgatcaccatcggagggctgccggacccc
accaccgtctttgagatctgcttccagctcatcaactactttgtgggcgtgtttgcgttc
tccatcatgattggccagatgagggatgtggtgggagcagcgaccgcaggagagaactac
taccgggcctgcatggacagcaccgtcaagtacatgaactcctacagcattccccaggaa
gtccagaaccggatcaagacttggtacgactacacctggaagagccagggcatgctggat
gaacaggagctcctgattcaacttcccactaagatgaggctggacatcgccgtggacgtc
aactactccatcgtcagcaaagtggctctgtttcagggctgcgaccggcagatggtgttc
gacctgctgaccaggctgaagtctgtcgtctacctgccaggagacttcgtgtgtaagaag
ggggagatcggacgggagatgtacatcatcaagcagggggaggttcaggtggttggcggg
ccggacctggagactgtgttcgtcaccatcagagccggttccgtgttcggagagatcagc
ctgctggcggggggcggagggaaccggcgcaccgccaacgtgaaggcgcacggcttcgcc
aacctgtttatcctggacaagaaggacctggcagagattctggtccactaccccgagtcc
cagaagctgctgcgcaagaaggccaagacgatgctgaccaaagacaagaagccggaggag
aaggagacgcgtaaggaggcggccgaggtcatccccccccgacccgacacccccaaactg
ttcaaggccgccctgaaggtcacggagcgcgccggcatcgagggaacattcgccaagatg
aagaaggtttaccaaccggctgagggccaaacggaggctccgccccccatctctccggtg
ccgcccccttctccgatgcaccgccgctctccagtcccgcgctcggctccggaggacatg
gacgagtcggtggcagagacggcggacagctccgtcatcatcaggatgacgccgcggcag
gaaggggaggagcttctgacggtggaggtgttggaggaaggagcaaagagggagaaggag
gaggagggatga
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