Gambusia affinis (western mosquitofish): 122823946
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Entry
122823946 CDS
T07758
Symbol
ptchd3a
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122823946 (ptchd3a)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Other domain-containing proteins
Patched domain-containing proteins
122823946 (ptchd3a)
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
122823946
NCBI-ProteinID:
XP_043959964
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Position
LG21:5156108..5162005
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AA seq
849 aa
AA seq
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MGCRRTDCLSRPLSNLFEKLGSTVGSYPLYFFVIPVLITASLSGGFVFLKDREDNDLERQ
FTPKKGPSKATRAFVRENFPYNTSMFSENRLYDKGNFASLIAVSKNGNNILDSPAFEDIV
RLNEKILDISVDKNGLGFSQVCAKANGKCFSNIILELIGGNETGITYPEHNHGSGSVFLG
SALGGVVTDANSTIQRAQAVKLYYYLNSQESAAEASKIWLREFKALLSDEMDRKNIDVSY
YTSKSKQEEIDSHTVDGFPLFLITYACAISFSVISCLRSDHVRNKMWVAVFGVLTSGLAV
VSSFGLLLYVGVPFVITVANSPFLILGIGLNNMFIMVSDWQHTHVNDPVPKRMGHTYKEA
VMSITITALTDVPKFFIGVMSDFPSVQSFCLYTATSIIFCYVYTITFFGAFMALNGRREA
SNRHWLTCMKVPSEKSANQTEMYNICCVGGSYDKLTGAEKKQPASNFFKDYYGPCLMKPW
VKGIVVFVYLAYLATSVFGCLHIQQGIELYDLAADDSHVTKFNIKDRQYFYDYGPSIMVI
VKGKLAYWDKDKRSQLQACIEDFKKLHFIDREVYTSWLDSYLSYGQEKHLDLDDKNVFLS
NLPPFFDLYPFFKQDVNQTGDAIHASRFFIQTVNITKASEEIEMLKILKSTVGRCQAASL
LVYNHEFIYFDQYDVVVKSTIKNVGVITAVMLVVSLLLIPNPVCSLLVTCSIGSVTAGVN
GFMTLWDISLDSISMIVFTVCIGFTVDFSAHVSYAFVSSEKPRPEDKAVDALSSLGYPII
QGALSTVVGVSVLSMSEFHTFRIFFKIFFLVMIIGMVHGLVFMPVFLTAGTCSSDKDEKH
EEDLKSSKF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcagacgcacagactgcctttctcgacctctgtcgaacctttttgaaaaactt
ggctccacagtgggctcctatccgctttatttctttgtcattcctgttttaatcacagcg
tctcttagtggggggtttgtttttctcaaagacagagaagacaatgatcttgagcgccag
tttacccccaagaaagggccctcaaaggcaacgagggcttttgttagggagaactttccg
tacaatacctccatgttttctgagaaccgcttgtacgacaaggggaactttgcatccctc
attgctgtctcaaagaacggcaacaatattttggacagccccgcttttgaggacatcgtc
aggctaaatgagaagatcctggacatttctgtggataaaaacggtctgggattcagccag
gtgtgtgccaaagccaatggaaagtgcttctcaaacatcatcctggaactcatcggtggc
aatgaaaccggcatcacctacccagaacacaaccacgggtccggttcagtcttcctgggc
tctgctcttggtggagtggtaacagatgctaacagcaccatccagagggctcaagctgtg
aagctctactactatttaaacagccaagaaagtgcagccgaggcctcgaagatatggctg
agagaatttaaagctctgctgtcggatgagatggacaggaaaaacattgacgtctcttac
tacacctctaaatccaagcaggaggagatcgacagccacaccgtagatggattcccttta
tttctcatcacttacgcctgcgctataagcttctctgtgatatcctgcctgagatcggac
catgtcaggaacaaaatgtgggtggctgtttttggcgttttaacctctggcctggcagtc
gtctcctctttcggcttgctgctttacgtcggagtgccgtttgtcataactgtggccaac
tctccttttttaatactcggaattggcctgaacaacatgttcatcatggtgtccgactgg
cagcacacccacgtgaacgaccccgtaccgaagcggatgggtcacacctacaaagaagcg
gtgatgtccatcaccatcaccgccttgacggacgtccccaagttctttatcggcgtcatg
tccgacttcccgtcagtgcagtccttctgtctgtacaccgccacctccatcatattctgc
tacgtctacaccatcaccttcttcggcgcattcatggctttaaacggcaggcgagaggct
agcaaccggcactggctaacctgcatgaaagtaccatcagagaagtcagcgaaccagacg
gagatgtacaacatctgctgcgtgggaggcagctacgataagctcacaggagcggagaaa
aaacaaccagcgagtaatttctttaaggattactacggaccttgtttgatgaaaccgtgg
gttaaaggcattgtagtctttgtttatctggcgtatttagctacaagcgtatttggatgt
ttacatattcagcagggaattgaactttatgatctggcagctgatgactctcatgttacg
aaattcaacattaaagacaggcagtatttttatgattatggcccatctatcatggtcatt
gtaaaagggaaattggcgtactgggataaggataaaagatctcaacttcaggcatgcata
gaagactttaaaaagctccacttcattgatagagaggtctacacatcctggttggactct
tacttgtcttatggtcaagagaaacatctagaccttgatgataagaatgtttttctctca
aatctgcctccattttttgatttatatccattttttaagcaagatgtgaaccagaccgga
gatgccatccatgcgtcccggtttttcatccaaactgtgaatattaccaaagccagcgag
gaaattgaaatgctcaaaatcctcaaatctactgtgggcagatgccaggcagcgtcttta
ttggtctacaaccatgagttcatctactttgaccagtacgacgttgtggtgaagagtacc
attaaaaacgttggggttatcacggctgtgatgttggtcgtctctctcctgctgattccc
aacccggtctgctccttgttggtcacttgttcaatcggctcagtcactgctggggtcaat
gggttcatgactctttgggacatcagtctggactccatatccatgatcgtcttcaccgtc
tgcatcggattcaccgtggacttctccgctcacgtgtcctacgcctttgtctccagtgaa
aagccccgtcccgaagacaaggccgtggacgcgctgtccagtctgggttaccccatcatc
caaggtgccctgtccacagttgtaggggtgtcggtcttgtctatgtctgaatttcacacc
ttcaggatcttcttcaagatttttttcctggtcatgattattgggatggttcatggcctt
gtttttatgccagtattcctgacagctggtacatgcagctcagataaagacgaaaagcat
gaggaagatttaaaatccagtaaattttga
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