Gambusia affinis (western mosquitofish): 122824852
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Entry
122824852 CDS
T07758
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122824852
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122824852
Ion channels [BR:
gaf04040
]
Ligand-gated channels
GABA-A
122824852
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122824852
NCBI-ProteinID:
XP_043961610
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Position
LG22:complement(21990273..22006260)
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AA seq
470 aa
AA seq
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MHTDVALFSVLLWMVEVSGHKNTKGQSLHPYKHIRLTQEMSPLGLSHKTASPIYKRSPDI
TKARATKSEQLLRIDDHDFTMRPGFGGPAVPVGVDVQVESLDAISEVDMDFTMTLYLRHY
WKDDRLSFKSNTNQSMTFDGRLVKKIWVPDMFFVHSKKSFTHDTTTDNVMLRVYPDGKVL
YSLRVTVTAMCSMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKEGNRSLNTDERISLSQ
FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDR
RAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDVYLWISFVFVFLSVIEYAAVNY
LSTLQERKERKLREKLPCTCGIAHPGMMSDCYSEVDVNTTGNYGMPEENGMRRERMLVEL
AMETDQMTGHVGSRAYSSIWIDTHAIDKYSRVIFPGSYILFNIIYWSIYS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggatgtggctctgttcagcgtgctgctctggatggtcgaggtgtccggacac
aagaacaccaaagggcaaagtctgcatccctataaacacatcaggttgacacaagaaatg
tctccacttggactcagtcacaagaccgccagcccaatatacaagagaagtccagatata
actaaagccagggctacgaagtcagagcagctgctgaggatagatgaccacgacttcaca
atgcgaccagggtttggagggcctgctgtcccagttggagtggatgttcaggttgaaagc
ctggatgcgatttcagaggttgatatggatttcactatgaccttgtatctgaggcactat
tggaaagacgatcgtttgtcattcaaaagcaacaccaaccagagcatgaccttcgatggt
cgcctggtgaagaagatatgggtacctgacatgttttttgtccactcgaagaagtcgttc
acacatgacacgaccacagacaacgtcatgttgcgagtgtaccccgatggcaaagtcctt
tacagcctcagagttacagtcacagccatgtgcagcatggacctgagtcgttttcctctc
gacacacaaacgtgctcgttggaaattgaaagctatgcctatacggatgatgacctgatg
ctgtactggaaggaagggaacaggtctttaaacacggatgagagaatttctctctctcag
ttcctcatccaggagttccatacgaccacaaagctggcattttacagcagtacaggctgg
tacaaccgactgtacatcaacttcaccctacggcggcacatcttcttcttcttgctgcag
acgtactttcctgccactctgatggtcatgctgtcctgggtgtccttctggatcgaccgc
agggctgttcctgccagagtgccacttggtataactactgtgctaaccatgtcaaccatc
atcactggagtcaatgcctccatgccgagggtgtcttatattaaagctgtggatgtttat
ctgtggatcagcttcgtcttcgtcttcctttcggtcatagaatatgccgctgtcaactat
ctgtccactctccaggaacgcaaggaaagaaaactgcgggagaagttgccatgtacttgc
ggcatagctcatcctggcatgatgtcggattgctacagtgaggtggacgtcaacaccaca
ggaaattacggcatgccagaggagaatggcatgagaagggaaaggatgctggttgaactg
gccatggagactgaccagatgacaggccatgttggctccagggcttatagcagcatctgg
attgacacacacgccatagacaaatactccagggtcatctttcctggatcttatatcctc
ttcaacatcatctactggtctatttactcttaa
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