Gambusia affinis (western mosquitofish): 122825301
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Entry
122825301 CDS
T07758
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122825301 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122825301 (usp19)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122825301 (usp19)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122825301 (usp19)
Ubiquitin system [BR:
gaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122825301 (usp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
122825301
NCBI-ProteinID:
XP_043962583
LinkDB
All DBs
Position
LG01:17726432..17748187
Genome browser
AA seq
1505 aa
AA seq
DB search
MASSGGDRVAGSETAGRRSGAQQRGGARENGSAQTSSTSKKKQKDKANQESREAKRAAAA
ANEALDGVLAEVKKDVFVDWKQNVNEVTVRLRCGDGVQRTEDINTTFTDTHCNVSFPDGR
QWSCQLQEEIEASCSKAQYKEKGGFLHLILHKKIPFHIWPSLKSNKKEKDVARPESRNET
KPSTLKSSEKARLALEQLQPRPPSSPAHDEQSRSAGRPERGFKRCFKNKASDKLAPDSAQ
VKKGSDDRSGDSIMSRAAAKGEQPSQEHSAARTTLRLPNMSKDPEGEPASDRSTAAAGKI
PHPSSHRHEDNREEKEGGSQESGAPGAAAGDRAQVEKTDESLDVSETTIPGTDGHLTAAD
ITDRFQNPAKSNKNTDSSPQTPRDGTDLELQGKPTERESQQDTFTSQQPGTTETLPEPAA
GATHRQSQSAGLTLKSSSCDGEEKQDQSKEEPTLEMMQQEAPEPMVNLPLVKNDSYEKGT
DLMVVNVYMKGICRETARVIFREQDFTLIFQTSDANFLRLHSGCGPNTVFKWQVKLRNLI
QPEQCSYSFTPSRLDITLKKRHSQRWGGLEAPASQGAVGGAKVAVPSSPACMEKSQPGSS
QHSLPAKEEPPRVGEEPTKASPRGVEETSLDTVAPRSVSEHVNITKAEPTVTTPQPKPTC
MVQPMTHAPPVANECHEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHD
RAFESEINCSNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQH
DAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRLDEVVAEEAWQRHKMRNDSFIVDLFQ
GQFKSKLVCPTCSKVSITFDPFLYLPVPLPQKQKVLSVFYFAKEPHKKPIKFLVSVSKEN
SSTAEVLESISRSVRVKSENLRLAEVAKNRFQRIFLPSHSLDTVSPSDMLFCFEVLSKDL
AKERVVLLRVQQKLQVPNIPISKCAACLKPPVSEEDKLKRCTRCYRVGYCNQHCQRTHWP
SHKSLCRPNSENVGLPFLVSVPESRLCYARLAQLLEGYSRFSVNVFQPPFQSGRTSPETA
QSRLDALPIALGSPDGAGGGDEARGAGGDVQAGNADLESPSLPPELQGEFSQASASHSEA
SGSFSLSSTRTKDSGFSESVSSTSCCSLDPQAEKETTCEKAVRPEAAITGYQQPSEAASG
HASQFYIGLLDSNNKEQRLDEKEDALADVVDDATLELVWKNNERLKEYVLVSSKELEYED
DPSSMSETARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLWRLPNVLI
IQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCIGQKDEMQQAPIYDLYAVINHYGGMI
GGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTMVEESQVVTRYAYVLFYRRRNSPVERPP
RFLSPGAESATATGASPSQASSQSLFGTDLDPEGPPTLTPEVPADIFAHSAECTAPSYSN
MEEVD
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcgggggagaccgagtagctggtagcgagacggcagggcgtcgtagtggg
gctcaacaacgaggaggcgctagggaaaacggctcagcacagaccagcagcactagtaag
aagaaacagaaggacaaggccaaccaggagagcagagaggccaagagggctgcagcagca
gccaatgaagcgctggatggtgttctggcagaggtcaagaaagatgtgtttgtggactgg
aagcagaacgtgaatgaagtgacggtcaggctgcggtgtggagacggggtgcagaggaca
gaggacatcaacaccacgttcaccgacacacactgcaacgtgtctttcccagatgggcgg
cagtggagctgtcagttgcaggaggagatcgaggcctcctgcagtaaagcacagtacaag
gagaaaggtggatttttgcatctcattttgcacaagaagattccgtttcacatttggccg
tctctcaagtcaaataagaaggaaaaggacgtggcccgtccagagtccagaaatgaaacc
aaaccttccaccctgaagtcatcggagaaagccagattagctttagagcagctgcagcct
cggcctccctcatcacccgcacacgacgagcagagccgcagcgctggcaggccggagcgc
ggcttcaaacgctgcttcaaaaacaaagcgagcgacaagttggccccggactcggcccag
gtgaaaaagggctccgacgaccgctctggcgacagcatcatgtcaagggcagccgcaaaa
ggcgagcagccatctcaggaacacagtgccgcacgcaccactttgcggctgcccaacatg
agcaaagacccagaaggggagcccgcctctgacagatctactgcagctgctggtaaaatt
cctcatcccagctcacacagacatgaagacaacagagaagagaaagagggaggcagccag
gaatcaggagcaccaggggcggctgctggagacagagctcaggtggagaagacagacgag
tcattagacgtgtccgaaacaacaatacctggaactgacggccatctaacagctgctgac
atcaccgatcgcttccagaacccagccaaatccaacaagaacacggattcttctccacag
acgccaagagacggaactgaccttgagctgcaaggaaaacccacggagcgtgaatcccag
caggacactttcacatcccagcagcctgggacaacagagacgctaccagaaccggctgcc
ggcgcaactcacaggcagagtcaatcagcaggtctaacgctgaagtcaagcagttgtgac
ggagaggagaaacaggaccagtcaaaggaagagcccactctggagatgatgcaacaggaa
gccccagagccgatggtcaacctgccgttggtgaaaaacgactcgtacgagaagggcaca
gacctgatggtggtcaacgtttacatgaagggaatctgcagggaaacggccagggtcatc
ttcagagagcaagacttcacccttatcttccagactagcgatgcgaactttcttcggctt
cattcaggctgtgggccaaacacggtgttcaagtggcaagttaaactcaggaacctgatc
cagccagagcagtgcagctactccttcaccccgtcccgcctggacatcaccctgaagaag
agacacagccagcgttggggcggcctggaggccccggcctcacaaggtgcagtgggtggt
gcgaaggttgctgtgccctccagccccgcctgcatggagaagagccagccaggcagcagt
cagcacagcctcccagccaaggaggagcccccgagggtcggagaggagcccaccaaggcg
tctcccagaggagtggaggaaacaagtctggataccgtagctccccgctccgtctctgag
cacgttaacatcaccaaagcagagcccacagtaaccacgcctcagcccaagcctacttgc
atggtgcagcccatgacccatgcaccacctgttgctaacgagtgccacgaggaagaggag
gagaagaaggtgtgcctgcctggattcacaggactggttaacctgggcaacacctgcttt
atgaacagtgtcatccaatccctgtctaacaccagagaactcagggattacttccatgat
cgagcgtttgaatccgagatcaactgcagtaatccgctgggaactggaggtaggctggcc
atcggctttgccgttctgctcagggctctgtggaaagggactcatcatgccttccaacca
tcaaaattaaaggcaatcgtggccagtaaggccagccagttcacaggttatgctcagcac
gatgcgcaggagttcatggccttcctcctggacggactccacgaggacctgaaccggatc
cagaataaaccctacactgagacggtggactctgacggacgtcttgatgaggtggtggca
gaggaggcatggcagcggcacaagatgagaaacgactcgttcatcgtggatctgttccaa
ggccagtttaaatccaagctagtgtgccccacatgctccaaggtctccatcacctttgac
cccttcctgtacctcccagttccgttgccacaaaaacaaaaagtgctctctgttttctac
ttcgctaaagaacctcataaaaaaccaatcaagtttctggttagtgtgagcaaggagaac
tccagcactgctgaggttctggaatctatctccagaagtgtgagggtcaagtctgagaac
ctcagactggcggaggtggcgaaaaatcgcttccagcgcatcttcctgccgtcccattct
ctggacaccgtgtcgccgtctgatatgttgttctgcttcgaggtgctttccaaagatctg
gccaaagaacgagtggtgctgctgagagtgcagcagaaactccaggtgcccaacatcccc
atctcaaagtgcgctgcctgcctgaaacctccagtgtccgaggaagacaaactgaagcgg
tgcacccgctgctaccgagtgggctactgcaatcaacattgtcagagaactcactggccc
agtcacaagagtctttgtcgccccaactctgagaacgtaggcctgccattcctcgttagc
gtcccagagtcccgcctgtgctacgcccgcctcgcccagctgctggagggttactccagg
ttttctgtaaacgtattccaacccccgttccagtcaggcagaacgtctcctgaaacagcc
cagtcccggttagacgcgctgccaattgcgctcggctctcctgacggtgctggaggcgga
gacgaggccaggggggcaggcggtgatgtacaggctggcaatgctgacttggagagcccc
tctctgcctcctgagctccagggggaattcagccaggcgtcggcgagccactccgaggcg
tcgggttccttctccctctccagcacccggactaaagactctgggttttccgagtccgtt
tcctccacttcctgctgctctctggaccctcaggccgagaaagagacgacatgtgagaaa
gcggtgcggccagaagctgcaataacagggtaccaacagccaagcgaggcagcgtcaggt
catgccagtcagttctacatcggtctgctggactcgaacaacaaggagcaaaggctggat
gagaaagaggatgctctcgcagacgtggtagatgatgcgaccttggagctggtgtggaag
aacaacgagcgtctgaaggagtatgtgctggtcagctctaaggagctggagtatgaagat
gaccccagctccatgagcgagacggccagagcaggacatttcaccctggagcagtgcctc
aatctcttcaccaagcctgaggtgttggcacctgaagaggcctggtactgtccaaagtgc
cagcagcaccgagaggcctccaagcaactcctgctgtggcgtctgccgaacgttttgatc
atccagctcaaacgtttctccttcagaagcttcatctggagggacaagatcaatgacatg
gtcgactttcctgtcaggaacttggatctgagtaagttttgcattggccagaaggacgag
atgcagcaggccccaatctacgacctctatgcagtcatcaaccattacggagggatgatt
ggagggcactacacagcgtacgctcgcctgcccagtgacaagaacagtcagcgcagtgat
gttgggtggcggctgtttgacgacagcaccgtgacaatggtggaggagagccaggtggtg
acgcgttacgcctacgtcctgttctaccgccgcaggaactcccccgtggagagaccacca
cgtttcctctctcccggagccgagtcagctacagccacaggagcttctcccagccaggcc
tctagccagtcactgtttgggacagatctggaccctgaaggaccccccaccctcaccccg
gaggtgccagctgacattttcgctcactctgcggagtgcacggcaccgtcctacagtaac
atggaggaggtggactag
DBGET
integrated database retrieval system
