Gambusia affinis (western mosquitofish): 122825554
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Entry
122825554 CDS
T07758
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1 isoform X1
KO
K12869
crooked neck
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122825554 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122825554 (crnkl1)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122825554 (crnkl1)
Spliceosome [BR:
gaf03041
]
Complex B
Other components
Prp19-related factors
122825554 (crnkl1)
Complex C
122825554 (crnkl1)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
122825554 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
122825554
NCBI-ProteinID:
XP_043962929
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All DBs
Position
LG22:371838..378255
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AA seq
765 aa
AA seq
DB search
METQWLLPSKTRLPATVPVGVTGNMASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREA
KERELELLPPPPKQKITDKEELNDYKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEI
QRARSIYERALDVDHRNITLWLKYAEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTY
MEEMLGNVAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKARSIYERFVMVHPEVKN
WIKYARFEERHGYVAHSRKVYERAVEFFGEEYVDENLFVAFARFEETQKEFERVRVIYKY
ALDRIPKHQAQELFKNYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYL
RLVESDTDADTVREIYERAIANVPPIQEKRHWRRYVYLWINYALYEELETKDPERTRQVY
QACLELIPHKKFTFAKIWLLFAQFEIRQKNLPGARKIMGTAIGKCPKNKLLKGYIELELQ
LREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDVERARAIFELAISQPRLDMPEVL
WKSYIDFEIEQEQFENTRNLYKRLLQRTQHVKVWISYAKFELSVDGPDRLQRSRQTYEDA
NKSMRSCDEKEERLMLLESWRDFEREFGSDGTRERVRKLLPEKVKKRRKLTAEDGSDAGW
EEYYDYIFPEDAANQPNLKLLAMAKMWKRQQAKDDEEEEERPTNPPEEEEQEEERSEEPA
AAPDKPPEGEAQMEKTYDDRDDSSSSSESEEEDGGKKQSSEEDKE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcaatggcttcttccttccaaaactcgtttgccagctacggtaccggttgga
gtcactggcaacatggcgtccacagcggcgggaaagcagcgtataccgaaggtggcgaag
gtgaagaataaagctcctgcagaggttcagatcaccgctgagcagctgctcagagaggcc
aaagagagggagctcgagcttctgcctcctccgcccaaacagaagatcactgataaagag
gagctcaatgactacaagctgaagaagaggaagggctttgaagacaacatcaggaagaac
cggaccgtcatcagtaactggattaaatacgcacaatgggaggaaagcctgaaggagatc
cagagagctcggtccatctacgagcgagcgctggacgtcgatcacagaaacatcactctg
tggctgaagtatgcagagatggagatgaagagccgccaggtgaaccacgcccgcaacatc
tgggacagagccatcaccatcctgccccgggtcaaccagttctggtacaaatacacctac
atggaggagatgctgggcaacgtggccggctgcaggcaggtgtttgagcgctggatggag
tgggagccggaggagcaggcctggcactcctacatcaactttgagctgcgctataaggaa
gtggacaaagcccggagcatctacgagcgattcgtcatggtccaccccgaggtgaagaac
tggatcaagtacgctcgcttcgaggagaggcacggctacgtggcgcacagcaggaaggtg
tacgagcgagccgtggagttcttcggggaggaatacgtggacgagaatctgtttgtggcc
ttcgccaggttcgaggagacccagaaggagtttgagcgggtccgagtcatctacaagtac
gccctggacaggatccccaagcatcaggcgcaggagctcttcaagaactacaccatgttt
gagaagaagttcggagaccgcagaggaatcgaggacgtcatcgtcagcaagagacggttc
cagtatgaagaggaggtcaaggcaaacccacacaactacgacgcctggttcgactacctg
cgcctggtggagagcgacacggacgccgacacggtgagagagatctacgagagagccatc
gccaacgtgccgcccatccaggagaagagacactggaggcgctacgtctacctgtggata
aactacgccctgtacgaggagctggagaccaaggaccctgagaggacgaggcaggtttac
caggcgtgtctggagctcatccctcataaaaagttcaccttcgcaaagatttggctgctc
tttgcccagtttgagatccgacagaagaacctgccaggagccagaaagatcatgggcacg
gccatcgggaaatgtcccaagaacaagctgctgaagggctacatcgagctggagctgcag
ctgcgagagtttgaccgctgcaggaagctgtatgaaaagtacctggagttcagcccggag
aactgcaccacctggatcaagttcgccgagctggagaccatcctgggcgacgtggagcga
gcccgcgccatctttgagctcgccatcagccagcccagactggacatgcctgaggtcctc
tggaagtcctacatcgactttgagatcgagcaggagcagtttgagaacacgaggaacctg
tacaagaggctgctgcagcgcacgcagcacgtcaaggtctggatcagttacgccaagttc
gagctgtcggtggacggacccgaccggctgcagcgcagccgccagacctacgaagacgcc
aacaagagcatgaggagctgcgacgagaaggaggagcgactgatgctgctcgagtcctgg
agggactttgagagggagtttggctccgacggcaccagggagcgagtccggaagctgctg
ccggagaaggtgaagaagaggaggaagctgacggccgaggacgggtcggacgccggctgg
gaggaatactacgactacatcttccctgaggacgccgccaaccagcccaacctcaagctg
ctcgccatggccaagatgtggaagaggcagcaggccaaggatgacgaggaagaggaggag
cgtcctacaaaccctccagaggaggaagagcaggaggaagagcgctctgaggagccggca
gcagctcctgacaaaccgccggagggcgaggcccagatggagaaaacgtacgacgaccga
gacgacagcagcagcagcagcgagagtgaggaagaggatggagggaagaaacagagcagt
gaggaagacaaagagtag
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