Gambusia affinis (western mosquitofish): 122831286
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Entry
122831286 CDS
T07758
Symbol
phf1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122831286 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122831286 (phf1)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122831286 (phf1)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122831286 (phf1)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122831286 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
DUF4537
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
122831286
NCBI-ProteinID:
XP_043973303
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All DBs
Position
LG05:29339776..29358866
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AA seq
542 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAAGVEE
VCCICDAPPLKEPLINCLKCHHGYHPECHTPTIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLLKPLLYGDRFYQFQCSVCTKGPETVQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGALSDTPRQDRCHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLVTDPPISITHRRSPLSLPCQRRVGGSESRKSKRRTMETQACPPPVA
ANPVELLPCCHGYMGGANLYNSRKLDEEMDASPPPKRMYALYHSTYNGNTPLSRGLHHYN
SMEDTCRLPPPCFPYPFSSSGTPHLHHLHQHHHHNHQHQPGQKQPEPLILRDVPPYQSGA
GGGGGSGGAGSGAGMGVGVGGGDGTVVRSWAGGGEAVRILARRVTPDGKVQYLVEWDNVG
LY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtcagtgagggagatgatgtgttggctcgttggagtgatggactactgtac
cttggcaatgtgaagagagtcgacggagtcaagcaatgctgcttggtgagattcgaggac
aactcagagttctgggttctgaggaaggacattcactcgtttgctgccggagtggaagaa
gtttgctgtatttgtgacgccccgcctcttaaagaacccctcataaattgtcttaaatgt
caccacggttatcatccggagtgccacacgccgaccatcgagccagaagctgacagcgac
tcctggatttgtcgacaatgtgtttttgctgtcgccaccaagagaggcggagctctgaaa
cgcggacgcttcgcccgactcatgcagttcatgaaactccggctcccctaccagctgtcg
tccttagactgggatcctcagcatctgaccaatcagcagcagtgttactgctactgcgcc
ggacctggagagtggaacctgaagatgctgcagtgtggcagctgtggtcagtggttccat
gaggcctgcactcagtgtctattaaagccattgctgtatggagacaggttttatcagttc
cagtgttcagtttgtacaaagggaccggagacagtccagaggctgcccatgacctgggtg
gacctggctcatttagtcctctaccacctctcgctgtgctgtaagaggaaatactttgat
ttcgaccatgaaattctgtccttcaccaacgagaactgggactcgttgctcctgggcgcg
ttgtctgacacgccgaggcaggaccgctgtcacaatctcctcaacgctctcaactctcac
aaggacaggtttgtctctggaaaggagatcaagaagaagaagtgtctgtttgggctgcag
gtccgagctccgcctcctctgacgtctgattcgtcgcctcttgtcaccgatccgcctatc
agcatcacccacaggagaagcccgttgtcactgccctgccagaggagagtgggggggtcg
gagtcacgtaaatcaaaacgtcgcaccatggagacacaggcctgtccaccaccggtcgct
gccaacccagtggaactgctgccatgttgccatggctacatgggcggagccaacctttac
aactccaggaagttggatgaggagatggatgcaagcccccctcccaagcgaatgtatgcg
ctgtaccactccacctacaacgggaacactcctctctccaggggtcttcatcactacaac
agcatggaggacacctgcagattacctccaccatgcttcccataccccttcagctccagc
gggaccccccacctccatcacctccaccagcaccaccaccacaaccaccagcaccagcca
ggtcagaagcagccggagcccctcatcctgcgcgacgttcctccgtatcagagcggcgcg
ggcggcggaggaggcagtggtggggcaggaagtggagcggggatgggtgtgggtgtgggc
gggggtgacgggactgtggtccggagctgggcaggaggaggggaggccgtgaggatcctg
gcaagacgcgtgactccagatgggaaggtgcagtacctggtggagtgggacaacgtgggt
ctgtactga
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