Gambusia affinis (western mosquitofish): 122833875
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Entry
122833875 CDS
T07758
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein rab7 isoform X1
KO
K07897
Ras-related protein Rab-7A
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04137
Mitophagy - animal
gaf04140
Autophagy - animal
gaf04144
Endocytosis
gaf04145
Phagosome
gaf04148
Efferocytosis
gaf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122833875 (si:dkey-13a21.4)
04145 Phagosome
122833875 (si:dkey-13a21.4)
04140 Autophagy - animal
122833875 (si:dkey-13a21.4)
04137 Mitophagy - animal
122833875 (si:dkey-13a21.4)
04148 Efferocytosis
122833875 (si:dkey-13a21.4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122833875 (si:dkey-13a21.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122833875 (si:dkey-13a21.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122833875 (si:dkey-13a21.4)
04031 GTP-binding proteins [BR:
gaf04031
]
122833875 (si:dkey-13a21.4)
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
122833875 (si:dkey-13a21.4)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122833875 (si:dkey-13a21.4)
Exosomal proteins of other body fluids (saliva and urine)
122833875 (si:dkey-13a21.4)
Exosomal proteins of colorectal cancer cells
122833875 (si:dkey-13a21.4)
Exosomal proteins of bladder cancer cells
122833875 (si:dkey-13a21.4)
GTP-binding proteins [BR:
gaf04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
122833875 (si:dkey-13a21.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_22
AAA_29
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
122833875
NCBI-ProteinID:
XP_043977756
LinkDB
All DBs
Position
LG07:complement(5436870..5440083)
Genome browser
AA seq
221 aa
AA seq
DB search
MGEEKTPVTLKTILIGNSGVGKSSVMNRYVDNRFTNMYRATIGTDFFSKAVRVNGSTVTL
QIWDTAGTERFQSLGTPLYRGSQCCMLVFDVTSLTSFSALEMWRKEFLVQGEPQDPEDFP
FVVLGNKTDLSNREVGLDSFADFLRCASAGKVSRKKAMQWCEEIGAEYFEGSAKEDLDME
KPFLRAAELGLQQYKKHTLENTGHFQITCEQPRETRNTCEC
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggaaaagactcccgtgactctgaagacgatactcataggaaactccggggtg
ggaaaatcgtccgtcatgaacagatatgtggataaccgcttcaccaacatgtacagagcc
accatagggacggactttttctccaaagcagtcagggtaaatgggagcacggtgaccctg
cagatctgggacacagcaggcacagagaggttccagtctctgggcacgcctctgtacaga
gggagccagtgctgcatgctggtgtttgacgtcacatccttgaccagcttcagcgccttg
gagatgtggaggaaggagttcctggtccagggagagcctcaggatccggaagactttccc
ttcgtcgtcctgggcaacaagacggacctgagcaaccgggaggtcggtctcgactcgttt
gcagacttcctccgttgtgcatcggctggcaaggtgtctcgcaaaaaggcaatgcagtgg
tgtgaagaaatcggggcggagtactttgaaggaagcgccaaagaggacctggacatggag
aagccatttttaagagccgcagagctcggcctccagcagtacaaaaaacacacattggaa
aatacaggacatttccagataacctgcgaacagccgagagaaactcgcaacacctgcgag
tgctga
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integrated database retrieval system
