Gambusia affinis (western mosquitofish): 122839321
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Entry
122839321 CDS
T07758
Symbol
ranbp2
Name
(RefSeq) ranBP2-like and GRIP domain-containing protein 4 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
gaf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122839321 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122839321 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122839321 (ranbp2)
03110 Chaperones and folding catalysts [BR:
gaf03110
]
122839321 (ranbp2)
04121 Ubiquitin system [BR:
gaf04121
]
122839321 (ranbp2)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122839321 (ranbp2)
Chaperones and folding catalysts [BR:
gaf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122839321 (ranbp2)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122839321 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
TPR_2
TPR_16
TPR_1
TPR_14
TPR_CcmH_CycH
TPR_8
ARM_TT21_C
TPR_7
DUF1681
PPR_1
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
122839321
NCBI-ProteinID:
XP_043986712
LinkDB
All DBs
Position
LG11:complement(18666438..18699077)
Genome browser
AA seq
3045 aa
AA seq
DB search
MRRSKAEVDRYVSSVQSSSPSLKEKPVRGFLFAKLYFEAKEYELAKRHVSEYLKVQERDP
KAHKFLGQLYEREGEINKAIGCYKRSVDLNPVQRDLVLKVAELFVGKGDCDSRAEFWVEK
AAKLMPGNPEVFNLKERLLSRQGQQGWNQLFDLLQAELAARPADALVNVKLVQLFCQDGR
LDEAVKHCLATEKKGLLRNSLDWYNVQLNTLQEYLAQPSISNNEKMCRRLQREVLLAHCS
LLRIRLSESGVQPSVDAFRSFDQAMQALSGFAARFADELFEVFVEMRAHLYLHAATLLLK
MAQDRQHTWRAVIDLAALCYLLAYQAPRPKTNVTKRDQAAPELLELLASDRQSQAGHMLF
NLSADTFTLIREVVEAFGNRSGQESLFELLWGPQASSASSFIANDDIHSLSSLGPELSKL
VKWDSGSILLHGGELQHLSWLGLQWTMLDQRPPMRDWLQQLFPRLTLETSKLDTNAPESI
CLLDLEVFLCGVVFCSHCQLQETAKISRSLSPRQQQLFEPRCLPLPLLRLLATQRQREWW
DAVYNLIHKRALPGTSAKLRMVVQHGLNTLRAGEKHGLQPALMIHWAQSLSQTGDGMNSY
YDQKEYVGRSVHYWQVVTSLLEKIKIRRSIPEPLNPLFMHFASKDIQISAVKGFEDEAKI
AFAVLLDIEGRTEEAIATLESINNMSSIWHLAQIYQRLAEEASNGVEETQDRCLTFLRKF
RSYLSKIYNANADDIERLPVSMEEVVDLLNDVNQQLGETQEDMEEEQEMNLQRGPIHSSP
ARLTETSATISHIKFASPSPSKSIVSPSKRLISPKTPPHWVEDQKSLLEMLCQQVEALKN
EVHDLKHNASVNSGSPHHKMYGDTYRAESLQEPFNPVQSYHGAPLTVATTGPPVYYNQSP
AYSSQYLLRTAANVTPTKGPVYGVNRMPPQQHMYAYQPPTHTPPLQTASSCIYPPQEQVF
GSPLRFESQATGLLSPYSEEYFGQNVAQQTTNPTLPEPGYFTKPSVAPVQPPKGVEGKSV
DFGKLSFSQQAAAEVPRVPNFGTGVVGPATTSPAFKFNCFPKSSERELNFCSPQTKQSES
LLGLLTSDLPPKPDSFPEKPPAQEQPPGHQSIFTFGNKNISSFSFADSISNASAGGLFGK
PEQPFKFREGMAFGIGKTSELEKTAESDESTHVEEDEDGPHFEPIVPLPDKVDVKTGEEE
EEEMFCNRAKLYRFDTETKEWKERGIGNIKILKHNTKGKVRLLMRREQVLKICANHYITA
DMLLRPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTVDEAALFKAKFEEAQKVTSKSPE
KQKQQEKKEETSKDLGLLASRFALKEGEWECAVCDVRNKATAGQCAACSTPNPQSSSKPE
LQVTTEAKSSPFSFKFGTDSSKPSGSTSTFTGFGAFGTSVPSSFAFGMSSSKPTDKPAGP
FGFSFGSQIPTKPEQWHCGKCSAKNEASTDSCASCKTPKTTVKTAEIAQIAPAPEVPATQ
SSVSAVDAGFAARFSKKPGQWDCDVCEVRNEASADKCVSCQTPNPAASKSSTVAPAAPAA
PAGSGFAAIFAMKDGQWDCNICLVRNEGSAAQCVSCQSPNPNPSLEAMFGKKEGEWDCDA
CLVRNKASSNECVACKTSNPNAKNTITSAASASSFSFNIGTTSSSNQPAGPAFTFGSSGA
FQFGQNKDKASTSAFKFEAPQAAPATTASSGFSFSMPIPAGGFKFGVQDSATDSASSNNQ
TSTVSASSILKNMADKHKEEENVATPSIDQTEKDENPLIAGKADAFSFADLAKSSEGTFQ
FGHKDPNFKGFCGAGAQIFASPQTTPIKAEASNELEDDGMYKTEEHDDIQFEPVVQMPDK
VDLVTGEEDEQVLYSQRVKLFRFDSGTSQWKERGVGTLKFLKNNTNGRLRVLMRRDQVLK
VCANHWITTTMNLKPLAGSDKAWIWMANDFSDGDAKLEQLAAKFKTTELAEEFKEKFEEC
QRLLLDIPLQTPHKLMDTGRTAHLIKKAEEMKSGLKDLKSFLTDEKTKIQDEEVQGDATA
ASELSSLGIRPHGETTGPTLEWDNYDLREEALDDTADSSVYTTPISSSPLRKNLFRFGES
TSGFSFSFQPGISPSKSPAKLNLSRASVGTDEEQDTTQDEERDGQYFEPVVPLPDLVEIS
TGEENELVVFSHRAKLYRYDKEVKQWKERGIGDLKILQSYETKRVRLIMRRDQVLKLCAN
HWISTAMRLEPMKGAEKAWVWSALDFAEEGEGKVEQLAVRFKMQETANTFKQVFEEAKAA
QEKSELMTPVMPRLSAPSESGLAATSESTTTSLCGQAAIAVLEETTRERTATSPAARSTE
AGCQSPVNPLKTVVSPPKFVFGSDSVQKIFGSPKSESQASASVSGLTARDGGSSAKPTIP
APAFKMHTGLDFRLFKDNPMAFWTSTSTVQFESAGSPQAAAGSDDDSDVEIVFVREPTAE
QAALARKLLLPLTFFCYKNEPGYTSDDEPDDEDFESAVRALNGKLYPDPPGAAVAVCAEE
PDCQFVWEKKPTPEEEERAKSLQLPPTFFCGLSATDSEPDSEEPEDFETELRKAQQDLVA
QLNRGEPVSSDPAEPSQASGPLTSRAEPADGRPTPDDQPGEKPTDTQGETPSSSSPIDLS
TKKSPEPESRTDTTAAHDSSSFGFNSVAGFSFADLAKNTDGFAFGSKDANFSWANAGATV
FGAAAPTEAKTTAAEEGSDEEEASSNVDIYFEPIVSLPEVETKSGEEDEEILFKERAKLY
RWDRDLGQWKERGMGDLKILFHPAKHFYRILMRRDQVLRVCANHTISESMELKPMNTSAN
ALVWTATDYSDGEGVVEQLAAKFKTSEIAESFRKTFCECQSRIGQTGDDASALSRVQEHS
RDTNPLVFLRVAADGEPLGSITIELFSHIVPKTAENFRALCTGEKGFGLQNSVFHRVIPD
FMCQGGDITKSDGTGGKSIYGAAFEDENFDVRHTGPGILSMANRGRDTNNSQFFITLKKA
EHLDFKHVAFGYVRDGMSVVQQMGELGTKGGAPAKKLVVTECGQL
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggagtaaggctgaagtggaccgctacgtttcctccgtacagagttcctctcct
tcactcaaagagaagcctgtcagaggatttctatttgcaaaactgtactttgaagcaaaa
gaatatgaacttgcaaaacggcatgtatcggagtatctcaaagtgcaggagagggatccc
aaagcacacaaattcctgggacagctctatgaaagagagggagagatcaacaaggcaatc
ggttgctacaagcgttcggtggacttgaacccggtgcagagagacctggtgctgaaagtt
gccgagctgtttgttggtaagggagactgcgacagcagagccgagttctgggtggaaaaa
gctgcaaaactcatgcctggaaacccagaagtcttcaacttaaaggagcgcctgttgagc
cgtcaaggccagcagggctggaaccagctgttcgacctcctccaggccgagctggcagcc
cggccggccgacgctctggtgaatgtaaagttggttcagctgttttgccaggatggccgg
ctggacgaggccgtcaaacattgtctggctactgagaaaaagggcttgctgcgcaacagt
ctggactggtacaacgtgcagctgaacacgttacaggagtatctggctcagcccagcatt
tcaaataatgagaagatgtgtcgacgtctccaaagagaagtgctgctggcgcactgcagc
ctgctgcgaatcagactgtctgagagcggcgtgcagccaagcgtcgacgcattcagaagt
tttgaccaagctatgcaggcgctgagcggcttcgccgcgcgctttgccgatgaactcttt
gaggtgtttgtggagatgagggctcacctgtacctgcatgccgctacgctgctcctgaaa
atggctcaggaccggcagcacacctggagagccgtcatcgacctggccgcgctctgctac
ctgctggcataccaggctcccagaccaaagactaacgtgaccaaaagggaccaggcggcg
ccggagctgctggagctgctggccagtgacaggcagagtcaggcggggcacatgctgttc
aacctgagcgccgacaccttcactttgataagagaggtggtggaggcgtttgggaaccgt
agcggtcaggagtctctattcgagctcctctggggtccgcaggcttcctctgcgtcctcg
tttatcgccaacgacgacattcactcgctcagctctctgggtccagagctctccaaactg
gtcaagtgggactcaggctccatcttgctgcacggcggggagctgcagcatctgagctgg
ctggggctgcagtggacgatgctggaccagaggccgcccatgcgcgactggctgcagcag
ctgtttcccaggctgacgctggaaacgtccaagctggacaccaacgcgccggagtcgatc
tgcctgctggacctagaggtgtttttatgcggcgtggttttctgcagccactgtcagctt
caggagacggcgaagatcagccgcagcctgagtccgcggcagcagcagctcttcgagcct
cgctgccttcctcttcctctcctccgcctcctcgccacgcagcgacagagggagtggtgg
gacgccgtctacaacctcatccacaaacgagcccttcctggtacgtcggccaaactgcgg
atggttgtgcaacacggcctgaacacactgagggccggagagaaacacgggcttcagccg
gcgctgatgatccactgggctcagagtctgagccagacgggcgatggaatgaactcgtat
tacgaccagaaggagtacgtcggccgcagcgtccactactggcaggtcgtgacttcactg
ctggagaaaataaaaatccgacgaagcataccagaaccgctgaaccctctcttcatgcac
ttcgcctctaaggacattcagatttccgctgtgaaaggttttgaagacgaagcgaaaatc
gcgttcgccgttcttctggacatcgaaggcagaactgaggaggcgatcgcgacactagaa
agcatcaacaacatgtcgtccatctggcatttagcacagatttatcagcggctggcagag
gaggccagcaatggcgtggaggagacccaggacaggtgtttaactttcctgaggaagttc
aggagctacttgtcaaaaatctacaacgccaatgcagacgacatcgaaaggcttcccgtg
tccatggaggaagtggtggacctcctgaacgacgtaaatcagcagcttggcgaaactcag
gaggacatggaagaggagcaggaaatgaaccttcagcgaggaccgattcactccagcccg
gctcgtctcacagaaaccagcgccaccatttcgcacatcaagtttgcttctccatctccg
agcaaaagcatcgtttctccttccaaaagactgatttcaccaaagactccgcctcactgg
gttgaagaccagaaaagtctccttgagatgttatgtcagcaagtagaagccctcaagaat
gaggttcatgatctcaaacacaacgcatcagtgaactccggctcgcctcaccataagatg
tatggagacacctacagagccgagagcttgcaggagccgttcaacccggtccagtcctac
cacggagccccactaacagttgccaccacaggccctcctgtttattacaaccagtctcct
gcctacagctcccagtatttactgcggacagcagcaaatgtaacccccaccaagggccca
gtgtatggggtgaaccgcatgcccccacagcagcatatgtatgcctaccagccgcccaca
cacacgcctccgctgcagaccgcctcatcctgcatctaccctccgcaggaacaagtcttc
ggttcccctcttcggtttgaatctcaagccacaggccttctctctccatacagtgaggaa
tattttggccagaacgtcgcccagcagactactaaccccactctgcctgagcctggctac
ttcaccaagccctctgtcgcccccgttcaaccaccaaagggcgtcgaagggaagtctgtg
gactttgggaagctttccttcagccagcaggctgcagctgaagtacccagagtgccgaat
ttcggcacaggagtagttggcccagctacaacttcacctgcttttaaattcaattgtttt
ccaaaatcctctgagagagaattaaatttctgttctccccaaaccaagcaaagtgaaagt
ttgctcggcctcctcacttcagatctccccccaaaaccagactcgtttccagagaagcca
ccggcccaagagcagcccccaggacaccagagcatcttcaccttcgggaataaaaacata
agcagcttctcgtttgcagattccatttcaaacgcatcagctggaggtctctttgggaag
cctgagcagccgtttaagtttcgtgaaggaatggcgtttggcatcggcaagacatcagag
ctggagaagaccgcagaaagtgacgagagcacacatgttgaggaggacgaagacggtcct
cactttgaaccgatcgtccctcttcctgataaggtggatgtgaaaacaggtgaagaagaa
gaggaggagatgttctgcaatagggcaaagctgtaccgattcgacacggagacaaaagaa
tggaaagaacgaggaatcggaaatattaaaatcctgaaacacaacactaaagggaaggtc
cgcctcctgatgagaagagagcaggtccttaagatctgtgcaaatcactacatcactgca
gacatgctactgagacctaacgccggctcggacaaatcctgggtgtggaacgccattgac
tatgcggatgaagagcctaaacctgaacagctggcgattcgcttcaaaactgtggatgag
gcggctcttttcaaagccaaatttgaggaagcccaaaaggtgacgagcaaatccccagaa
aagcaaaaacagcaagagaagaaagaggaaacgtccaaagacttgggtttactggcgtct
cggttcgctcttaaagaaggcgagtgggagtgcgctgtatgtgatgtacgaaataaagca
acagctgggcagtgtgcagcatgcagcactcccaatccacagtcttcatctaaaccagaa
cttcaggtaactactgaagccaaatccagcccgtttagcttcaagtttggtaccgattca
tcaaagcctagtggttcaacctctacatttacaggatttggtgcttttggaacttcagta
ccctcctcttttgcattcgggatgagctcctcaaaacctaccgacaaaccggctggtcca
tttggtttcagctttggttcacaaattcccacaaagccggagcagtggcactgtggcaag
tgttctgcaaagaatgaagcatcaacagacagttgtgcttcttgtaaaactcctaaaact
acagtcaaaacagccgagatagcacaaattgctccagcaccagaagttcctgctacacag
tcttctgtatctgcagttgatgctggatttgctgcacgcttcagcaaaaagccaggacag
tgggactgtgatgtttgtgaagtgagaaatgaagcctctgcagacaaatgtgtttcctgt
caaactccaaacccagcagcttcaaaatcctccactgtggcaccagcagcaccagctgca
cctgcaggatcagggtttgcggcaatttttgccatgaaagacggacagtgggactgcaac
atctgtttggtcagaaatgaagggtcagcagctcagtgtgtttcctgccagtctccaaat
ccaaatccttctttagaggccatgttcggcaagaaggaaggggaatgggactgtgacgct
tgtctcgtgagaaataaagcctcctccaatgaatgtgtggcatgtaaaacctcaaaccct
aatgctaaaaacacaatcacatctgctgcttctgcctcgtctttcagtttcaacattgga
accacaagttcatccaaccagcctgctggacctgcatttacttttgggagcagtggtgct
tttcagtttggacaaaataaagacaaagcttcaacatctgcattcaagtttgaagctcct
caggctgcgccagccaccacagcctcctctggattctctttttcaatgcccattccagct
ggtggcttcaagtttggcgttcaagactctgcaacagattcggcctcatctaataatcaa
acttcaacagtgtctgcttccagtatcctcaaaaacatggctgacaaacacaaggaggaa
gaaaatgtggctacgccttccatagaccaaacggaaaaagatgaaaatcctttaattgct
ggaaaagccgatgcgtttagttttgcagacttggccaagtcctccgaaggaacctttcag
tttggccataaagatcccaacttcaaaggtttctgtggagcaggggcgcagatattcgca
tcgccacagacgacccctatcaaggcagaggcctcaaacgaactggaagacgacggcatg
tataaaacggaagaacacgacgacatccagtttgaaccagtggtccagatgcctgacaaa
gtggacctagtgactggtgaggaagatgagcaggtcctctactcccagcgtgtcaaactc
ttccgattcgactccggcactagtcagtggaaggaacgtggtgtaggaaccctgaagttc
cttaaaaataacacaaatggccggctgagagtgctaatgagaagggatcaagttctgaag
gtttgtgccaaccactggatcaccaccaccatgaaccttaagccactggctggctcagac
aaagcctggatatggatggccaacgacttctctgatggagatgctaaactcgaacagctg
gcagccaaatttaaaaccacggagctagcagaggagttcaaagagaagtttgaggaatgt
cagagacttcttttggatatccctctgcagacgccccataagctgatggacactggtcga
acggctcacctcatcaagaaagcagaggagatgaagtctggtttaaaagacttaaaatcg
tttttgacggacgagaagacaaaaatccaagacgaagaagtgcagggagacgctactgcc
gcaagcgaactttccagtttagggatcaggcctcatggggaaacaacaggccctaccttg
gagtgggataactacgacctacgggaagaagctttggatgacactgctgactcatcagtc
tacaccacccccatttcgagcagccccctgaggaagaacctcttccgctttggagaatcc
acaagtgggttcagcttcagtttccaacccggcatcagcccatccaagtctcctgcaaag
ctcaacctgagcagagcatcagtgggtaccgacgaggagcaggatacaactcaggacgaa
gagcgagacggacagtactttgaacctgtcgtacctttgcctgacttggttgagatttct
actggagaggaaaatgagctggtggtcttcagccacagagccaaactgtaccgctatgac
aaagaggtgaaacagtggaaggagaggggcattggagacctcaagatcctgcaaagttat
gagaccaaacgtgtgaggttaataatgaggagagatcaggtgctcaagctctgtgccaac
cactggatctctaccgccatgaggctggagcccatgaagggcgcagaaaaggcctgggtc
tggagtgccttggactttgccgaagaaggagagggcaaagttgagcagctggctgtgagg
tttaagatgcaagagactgcaaatacattcaaacaggtctttgaagaggccaaggcggcg
caggaaaaatccgaactcatgactcctgtgatgccaagactctcagcaccatcagaaagt
ggattggcagcaacatctgaaagcacaactacatctctttgtggacaagcagctattgct
gttctggaagaaacaacacgggaacgtacagcaacttctccggccgccaggtcaactgaa
gctggatgtcagagtcctgttaaccccctgaagaccgtggtgtctccaccaaagtttgtg
ttcggctctgattctgttcagaagatttttggctctcctaaatcagagtcccaagcatct
gcatctgtgtcgggtttgacggccagagatggtggaagctcagccaagcctactattcct
gcgccagcattcaaaatgcatacagggctggattttaggcttttcaaagataacccaatg
gccttttggaccagcacatccaccgtccaatttgaaagcgcaggctctcctcaggcggcg
gcgggttcggatgacgactccgatgtggagatagttttcgtcagagagcccacagctgag
caggcggctttagccaggaagctcctgctgcctctcaccttcttctgctacaagaacgag
ccaggctacaccagcgatgacgaacccgatgatgaggactttgagtcggctgtaagagcc
ttgaatggaaagctttacccagatcctcctggagcagcagtagcagtctgtgctgaggag
ccagactgccagtttgtttgggagaagaaaccaacgccagaggaagaggagcgggcgaag
agcctccagcttcccccgacgttcttctgcggcctgagcgccacagacagcgaaccggac
agcgaggagcctgaagactttgagacggagctacgcaaagcccaacaagacctggttgcc
cagttaaacagaggtgagccggtctccagcgatcctgcagaaccctcacaggcctcaggc
ccgttgaccagcagagcagaacctgcagacggcagacccacaccagacgatcagccagga
gaaaaacccacagacactcagggtgaaactcccagcagcagctctcctatcgacctgtcc
actaagaagagcccagaaccagagtccagaaccgacaccacagctgctcacgattcttcc
tcctttggcttcaactcagtcgctgggttttcgtttgctgacctcgccaaaaacactgac
ggattcgcatttggatctaaagatgccaatttctcctgggcgaatgccggagcgactgtg
tttggagctgcggctcccactgaggcaaaaaccacggccgccgaggagggaagtgatgaa
gaggaggcctccagcaacgtggatatctactttgagcccatcgtttctctacctgaggtg
gagacgaaatctggcgaggaagatgaggaaatcttgtttaaagagcgagccaagctctac
cgatgggaccgcgacctcggccagtggaaagagcgcggcatgggagacctcaagatcctc
ttccacccggccaaacacttctaccggatcctgatgcgaagagaccaggtgctgagggtt
tgtgccaaccacaccatctcagagtccatggagctgaaacccatgaacacctccgccaac
gcgctcgtctggaccgccacagactactcggatggtgaaggtgtggtggagcagctggca
gccaagttcaaaacctcagagatagccgagtcgttcaggaagaccttctgcgaatgtcag
agccgcatcggccaaaccggcgacgacgcctcggcgctgtccagagtgcaggaacactcc
agagacacgaacccgctggtgttcctcagggtggcagccgacggcgagccgctgggctcc
atcaccatcgagcttttctcccacatcgtccccaaaacggcggagaacttcagagcgctg
tgcaccggagagaaaggcttcggcctccagaactccgtcttccatcgggtcataccggac
ttcatgtgtcagggaggcgacatcaccaaaagtgacggcaccgggggcaaatccatctac
ggcgccgcgttcgaggacgaaaacttcgacgtcaggcacacggggccgggcatcctgtcg
atggcgaaccgtgggcgggacaccaacaactcgcagttcttcataacgctgaagaaagct
gaacatttggacttcaaacacgtggcgttcggctacgttcgggacgggatgagcgtggtg
cagcagatgggagagctgggcacgaagggcggagctcccgccaagaagctggtcgtcaca
gagtgcggacagctgtag
DBGET
integrated database retrieval system
