Gambusia affinis (western mosquitofish): 122842935
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Entry
122842935 CDS
T07758
Name
(RefSeq) calpain-2 catalytic subunit-like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04141
Protein processing in endoplasmic reticulum
gaf04210
Apoptosis
gaf04217
Necroptosis
gaf04218
Cellular senescence
gaf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122842935
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122842935
04217 Necroptosis
122842935
04218 Cellular senescence
122842935
09144 Cellular community - eukaryotes
04510 Focal adhesion
122842935
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122842935
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
122842935
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C2: calpain family
122842935
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
122842935
NCBI-ProteinID:
XP_043993180
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Position
LG13:18931120..18939073
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AA seq
726 aa
AA seq
DB search
MSGIATKIQHFREKSQGIGCNSHTRKYLNQDFEELRRSCLERGQLFQDDCFEALPSSLGF
NELGPNSYKVRGVTWTRPTELCQNPKFISKDATRTDICQGALGDCWLLAAIASLTLNKQV
LSRVVPHDQSFTENYAGIFHFQFWQFGDWIDVVVDDRLPTRDGELLFVHSAEGSEFWSAL
LEKAYAKINGCYEALSGGSTIEGFEDFTGGIAERHELARPDPRLFKIIQKALNRGSLLGC
SIDVRLSSSIRTMFAIFEVLVSHYLFLLQITSAADSEAITHHKLVKGHAYSITGAEQVEY
QGEMVQLIRIRNPWGQVEWTGAWSDNSYEWKSVSSEDQERLTNRSEDGEFWMSFSDFLRE
YSRLEICNLTPDTLTDDEYQKWAETEFEETWKRGVSAGGCRNYPDTFWTNPQFVIKLDEV
DDDPDDGEEGCTVIVGLMQKNKRSRRKMGEDMETIGFAIYDLPEEYSGKTQVHLKKDFFL
YNRSAARSETFINLRELCNRFCLPPGEYLIVPSTFEPNKNGDFYVRVFSEKQANVQEIDD
PVESHVEKIDIDEDDISDRFKRLFGQLAGEDVEISAFELQRVLNRVVAKRDDIQTNGFSL
ATCHNMINLLDKDGTGKLGLVEFKILWTKIEKFLDLFRSKDVDQSGYMSSSEMRVAVEEA
GFSLNNSLHQIIVARYSEANLTIDFDNFVGCLIRLETLFSTFEGLDKDGSGTIELNFMEW
LTVTML
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcattgcaaccaaaattcagcatttcagagagaaatcgcagggaattggatgc
aactctcacacacggaaatacctgaaccaagactttgaggagctgaggagaagctgtctg
gagagaggacagttgtttcaggatgactgcttcgaagctctgccttcatccttaggcttc
aatgagctcggaccaaactcctacaaagtgcggggagtcacctggacgaggcccactgag
ttgtgccaaaacccaaaattcatctctaaagatgccacaaggactgatatttgtcaggga
gcactaggtgactgctggctcctggcagctattgcctctctaactctcaacaagcaggtt
ttgtcccgtgttgtgccccatgaccaaagctttactgaaaactatgctggaattttccac
ttccagttctggcagtttggtgactggatagatgtggttgttgatgatcgcttgcccacc
agagatggagaactcctgtttgttcactcagcggagggctctgagttttggagcgccttg
ctggagaaagcctacgctaaaataaatggatgctatgaggctctctctggaggcagcacc
attgagggctttgaagacttcactgggggcatcgcagagcgacatgaactggcgagacca
gatccacgtctcttcaaaataatccaaaaggccttgaatagaggctcccttttgggatgc
tccattgatgttcgtctgagttcgtctatcagaactatgtttgctatctttgaggtactt
gtttcacattatctttttttgttgcagatcactagtgcagctgattctgaggcgatcaca
catcacaagctggtgaaggggcacgcttactccatcacaggagctgaacaggtggagtat
caaggagaaatggtgcagctgatcaggatcagaaacccatggggtcaagtggagtggacg
ggcgcatggagtgacaactcttatgaatggaaatctgtgagcagtgaggatcaggagcga
ctgaccaaccgatctgaggatggagaattctggatgtccttttccgacttccttcgtgag
tattcccggcttgagatctgcaaccttaccccggacactctgacagatgacgaataccag
aaatgggcagagacagagtttgaggagacatggaagagaggtgtgtcagctggcggctgc
aggaactatccagacaccttctggacaaatcctcagtttgtgataaagctggacgaggtg
gacgacgaccctgatgacggtgaggagggatgcacggtcattgtgggcctgatgcagaaa
aacaagcgcagtaggaggaaaatgggagaagacatggagactattggatttgcaatttat
gatcttcccgaggagtactctggtaagacccaggtgcacctgaagaaagatttcttcctg
tacaaccgttcagcagcacgctccgagaccttcatcaacctgagggagctgtgcaaccgc
ttctgtcttccccctggagagtatctcattgttccctccacctttgagcccaacaaaaac
ggggacttctatgtgcgggtgttctctgagaaacaagcaaatgtccaagagattgatgat
ccagtagaaagccatgtggagaagattgatattgatgaagacgacatcagtgacagattc
aagaggctttttggacagcttgcaggagaggatgtggaaatttctgcattcgagctgcaa
agagtcctcaacagggtggtggcaaagagagacgacatccaaaccaatgggtttagtctt
gcaacttgtcacaatatgattaacctgctggataaagatggaactggcaagctgggcctg
gtagagtttaagatcctgtggacaaagattgagaaatttctggatctgttcagatcaaaa
gatgtagatcaaagtgggtacatgagctcctccgagatgcgggtagccgtcgaggaggcg
ggtttctctctgaacaactctctccatcagatcattgtggctcgctacagtgaagcaaat
ctcaccattgactttgacaactttgtgggctgcctgattcgtttggagacacttttcagc
acttttgaagggctggacaaagatggttctggtaccatcgagctgaacttcatggagtgg
ctgactgtgacgatgttgtaa
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