Gambusia affinis (western mosquitofish): 122844184
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Entry
122844184 CDS
T07758
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122844184
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122844184
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_5
Ig_3
LRR_4
ig
Ig_2
V-set
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
122844184
NCBI-ProteinID:
XP_043995345
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Position
LG14:complement(12124591..12133385)
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AA seq
609 aa
AA seq
DB search
MFKGTAAHLCLYWRAVYLLAAGVALPSESLWLCPPSCRCNAAALEANCSGAQLSAVPDGL
PQDGELLNLTHNTIKTLVNQQFHKLTQLLHLDLSDNLLAVVEVEAFLGLQNLLTLRLSRN
HLRIISVGVFAGLTNLQLLDISSNKILVLLDFTFTDLGSLQVFLADNNDFVFISNQAFAG
LSGLQRLDLDGSNLTAVPTEALTQLSVLKSLHIHQLDLNLLPNYSFYPLLHLKELVVAHF
PRLETLSGNSLFGLNLTSLSIKHCNLKEVPYTALHHLVYLVSIDLSFNPITYIHGNLLGD
LLRLQEFHLVGGSLASIETGAFKGLGYLSVLNVSRNLLTTLEAGSFHSVVTLKSLGLDNN
PLACDCRLLWVARRRLYVNFGGFLPTCMTSTKLQAWNFLEVPEDELLSLLTCRQARIVDR
RPQDVRVNQGHSVLFYCSSEGDPQPSVSWLNPQLRQVSPVGRIRALSNGSLEVRYAQPHD
SGTYICVASNAAGNESLRISLHVQALPSSPKKRYRLKGWPAFPSSAPGVDGDEKLPFDVK
TLLIAATIGFVSFFGSVSVCFVFMFFWSKGKGQIKHTATIAYVPRSAMSNSNTGTSNYME
TSRFTMKLL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaggggactgcagcccacctgtgtttgtactggagggctgtgtacctgctggct
gcaggggtggcgctaccgtccgaatccctctggctgtgtccaccatcctgtcgctgcaac
gccgctgctctggaggcaaactgctcaggcgctcagctcagtgccgtgcctgacggtctc
ccccaagatggagagctgctcaacctgacccacaacacgatcaagactctggtgaatcag
caatttcacaaactaactcagcttttacacctcgatttaagtgacaatctattggcggtg
gttgaagtggaagccttccttggcctgcagaatctgctcactctccgtctttctcgcaat
cacctcaggattatctccgtgggagtgtttgctggtttgacgaacttgcagttgctagat
ataagcagcaataagattcttgtcctcttagactttaccttcacagacttaggatctctg
caggttttcctagcagacaataacgactttgtttttatctctaatcaagccttcgctgga
ctgagtggcctacagaggctggatcttgacggctctaacctcactgctgtgccaaccgag
gcgctcactcagctgagtgtgttaaaaagccttcacattcaccagctggacctcaacttg
ctgccaaactactctttctaccctctgctgcacctaaaggagctcgtcgttgcacatttt
cccaggctggaaactctgtcaggaaacagtttgttcggcctcaatcttacatccttatcc
atcaagcactgcaaccttaaagaggtgccatacactgctttgcatcaccttgtttacctc
gtgtccattgacctttctttcaaccctataacctacattcatgggaacctgcttggagac
ttactccggcttcaagagtttcatctcgtcggtggctcactggcaagcatcgaaactgga
gcatttaaaggtttgggatatttaagtgtgttgaatgtttcacgaaaccttctcactact
ctcgaggcagggtctttccattcagtggtaaccttaaaaagcctagggctcgacaacaac
cccctcgcatgtgactgccgcctgctttgggtggctcgaaggcggctgtatgtgaacttt
ggtgggtttctgccgacctgcatgacttccaccaagctgcaggcctggaattttctggag
gtccccgaggacgaactactaagcctgctcacctgccggcaggctcggattgtggaccgg
aggccccaagatgtgagagtgaatcaaggacactctgtgctgttttactgcagctcagaa
ggtgacccccagccatctgtcagctggcttaatccccagctaaggcaggtttcacctgtt
ggcaggattcgggccctctccaacggctccctggaggtgcgctacgctcagccacatgat
agcggcacttatatctgcgtggcgtccaatgcagcaggaaatgaaagcctgcgcatcagc
cttcatgtccaagccttgccatcatctcctaaaaaacgctatcgtctaaaaggctggcct
gcctttccttcctctgcccctggagtggatggagatgaaaagctcccgtttgatgtgaag
actcttctgatagcagcaacgatcggattcgtctcattctttggctcagtgtccgtgtgc
ttcgtttttatgttcttctggagcaaaggaaaggggcaaatcaagcacacggcaacgatt
gcctatgtgccacgcagcgccatgtccaacagcaacacagggacgtcaaactacatggag
accagcaggttcaccatgaaactcttatga
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