KEGG   Gambusia affinis (western mosquitofish): 122845198
Entry
122845198         CDS       T07758                                 
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K08770  ubiquitin C
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03320  PPAR signaling pathway
gaf04120  Ubiquitin mediated proteolysis
gaf04137  Mitophagy - animal
gaf04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122845198 (ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122845198 (ubb)
   04137 Mitophagy - animal
    122845198 (ubb)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    122845198 (ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gaf04121]
    122845198 (ubb)
Ubiquitin system [BR:gaf04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122845198 (ubb)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 122845198
NCBI-ProteinID: XP_043997290
LinkDB
Position
LG15:16384814..16391588
AA seq 685 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGQ
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccctcaccggcaaaaccatcaccctggaggtggagcccagc
gataccattgagaatgttaaggccaagatccaggataaggagggcatcccccctgaccag
cagaggttgatctttgccggaaagcagcttgaagatggccgcaccctgtctgactacaac
atccagaaagaatccacactccacttggtcctccgcctcaggggtggtatgcagatcttc
gtcaagaccctcaccggcaaaaccatcaccctggaggtggaacccagtgacaccattgag
aacgtcaaggccaagatccaggataaggagggcatcccccctgaccagcagaggctgatc
tttgctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaaggag
tccacccttcacctggtcctccgtctgagaggtggcatgcagatcttcgtcaagactctc
actggtaaaaccatcaccctggaggtggagcccagcgacaccattgagaacgtcaaggcc
aaaatccaagacaaggagggcatcccccctgaccagcagaggctgatctttgccggcaaa
cagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccaccctccac
cttgtcctccgtctcagaggtggcatgcaaatcttcgtcaagacccttactggcaagaca
atcaccctcgaagttgagcccagcgacaccattgagaacgtcaaggccaaaatccaggat
aaggagggcatcccccctgaccagcagaggctgatctttgccggaaagcagctggaggat
ggccgcaccctgtccgactacaacatccagaaagaatctaccctccaccttgttctccgt
ctcaggggtggcatgcaaatctttgtcaagaccctcaccggcaagaccatcaccctggag
gtggaacccagtgacaccattgagaatgtcaaggccaagatccaggataaggagggcatc
ccccctgaccagcagaggctgatctttgctggcaagcagctggaggatggccgcaccctg
tctgactacaatatccagaaagaatccaccctccaccttgttctccgtctcaggggtggc
atgcagatcttcgtcaaaacactcactggcaaaaccatcaccctggaggtggagcccagc
gacaccattgagaacgtcaaggccaagatccaggataaggagggcatcccccctgaccag
cagaggctgatctttgctggcaagcagctggaggatggccgcaccctgtccgactacaac
atccagaaagaatccaccctccaccttgttctccgtctgaggggtggcatgcagatcttt
gtcaagaccctcactggtaaaaccatcacccttgaggtggagcccagtgacaccattgag
aatgtcaaggccaagatccaggataaggagggcatcccccctgaccagcagaggctgatc
tttgccggaaagcagctggaagatggccgcaccctgtctgactacaacatccagaaagaa
tctaccctccaccttgttctccgtctgaggggtggtatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggtggagcccagcgacaccattgagaacgtcaaggcc
aagatccaggataaggagggcatcccccctgaccagcagaggctgatctttgccggcaaa
cagctggaggatggccgcaccctgtctgactacaacatccagaaggagtccacccttcac
ctggtcctccgtctcaggggtggcatgcagatcttcgtcaagaccctcaccggcaagacc
atcaccctggaggtggagcccagcgacaccattgagaacgtcaaggccaagatccaggat
aaggagggcatcccccctgaccagcagaggctgatctttgctggcaagcagctggaggat
ggccgcaccctgtccgactacaatatccagaaggagtccacccttcaccttgtcctccgt
ctgaggggtggccagtaa

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