Gambusia affinis (western mosquitofish): 122845198
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Entry
122845198 CDS
T07758
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K08770
ubiquitin C
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03320
PPAR signaling pathway
gaf04120
Ubiquitin mediated proteolysis
gaf04137
Mitophagy - animal
gaf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122845198 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122845198 (ubb)
04137 Mitophagy - animal
122845198 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
122845198 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122845198 (ubb)
Ubiquitin system [BR:
gaf04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122845198 (ubb)
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
122845198
NCBI-ProteinID:
XP_043997290
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Position
LG15:16384814..16391588
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AA seq
685 aa
AA seq
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MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctcaccggcaaaaccatcaccctggaggtggagcccagc
gataccattgagaatgttaaggccaagatccaggataaggagggcatcccccctgaccag
cagaggttgatctttgccggaaagcagcttgaagatggccgcaccctgtctgactacaac
atccagaaagaatccacactccacttggtcctccgcctcaggggtggtatgcagatcttc
gtcaagaccctcaccggcaaaaccatcaccctggaggtggaacccagtgacaccattgag
aacgtcaaggccaagatccaggataaggagggcatcccccctgaccagcagaggctgatc
tttgctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaaggag
tccacccttcacctggtcctccgtctgagaggtggcatgcagatcttcgtcaagactctc
actggtaaaaccatcaccctggaggtggagcccagcgacaccattgagaacgtcaaggcc
aaaatccaagacaaggagggcatcccccctgaccagcagaggctgatctttgccggcaaa
cagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccaccctccac
cttgtcctccgtctcagaggtggcatgcaaatcttcgtcaagacccttactggcaagaca
atcaccctcgaagttgagcccagcgacaccattgagaacgtcaaggccaaaatccaggat
aaggagggcatcccccctgaccagcagaggctgatctttgccggaaagcagctggaggat
ggccgcaccctgtccgactacaacatccagaaagaatctaccctccaccttgttctccgt
ctcaggggtggcatgcaaatctttgtcaagaccctcaccggcaagaccatcaccctggag
gtggaacccagtgacaccattgagaatgtcaaggccaagatccaggataaggagggcatc
ccccctgaccagcagaggctgatctttgctggcaagcagctggaggatggccgcaccctg
tctgactacaatatccagaaagaatccaccctccaccttgttctccgtctcaggggtggc
atgcagatcttcgtcaaaacactcactggcaaaaccatcaccctggaggtggagcccagc
gacaccattgagaacgtcaaggccaagatccaggataaggagggcatcccccctgaccag
cagaggctgatctttgctggcaagcagctggaggatggccgcaccctgtccgactacaac
atccagaaagaatccaccctccaccttgttctccgtctgaggggtggcatgcagatcttt
gtcaagaccctcactggtaaaaccatcacccttgaggtggagcccagtgacaccattgag
aatgtcaaggccaagatccaggataaggagggcatcccccctgaccagcagaggctgatc
tttgccggaaagcagctggaagatggccgcaccctgtctgactacaacatccagaaagaa
tctaccctccaccttgttctccgtctgaggggtggtatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggtggagcccagcgacaccattgagaacgtcaaggcc
aagatccaggataaggagggcatcccccctgaccagcagaggctgatctttgccggcaaa
cagctggaggatggccgcaccctgtctgactacaacatccagaaggagtccacccttcac
ctggtcctccgtctcaggggtggcatgcagatcttcgtcaagaccctcaccggcaagacc
atcaccctggaggtggagcccagcgacaccattgagaacgtcaaggccaagatccaggat
aaggagggcatcccccctgaccagcagaggctgatctttgctggcaagcagctggaggat
ggccgcaccctgtccgactacaatatccagaaggagtccacccttcaccttgtcctccgt
ctgaggggtggccagtaa
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