Gluconobacter albidus: A0U94_08625
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Entry
A0U94_08625 CDS
T04736
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
gal
Gluconobacter albidus
Pathway
gal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gal00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A0U94_08625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gal03021
]
A0U94_08625
Transcription machinery [BR:
gal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A0U94_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
FTA4
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
AQS91026
UniProt:
A0A149TFE0
LinkDB
All DBs
Position
complement(1898018..1899976)
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AA seq
652 aa
AA seq
DB search
MATKTASGTDRNAQEQEGDTTLLDTQSAAVKRLIAKGRERGHITFDELNAVLPQDQMSSE
QIEDIMAALSEMGIQVIENEEQDEAEGPAEKEAEAETEEAEGPQGGNVDAEAASRTDDPV
RMYLREMGSVELLSREGEIAIAKRIEAGRDEMIGGLCESPLTIRAIISWHERLKDGEMLL
RDIVDLEASQGGGPDPDAVEGEEGDEASEEDDKAEDESEEGDGEQQEGSGLSLSALEEKL
KPEILARFEAIEPLYHKLRKIQIKRIEALTGGEDHSDKSEQTYEKLRHELVSLVEQVHLH
NNRIEELVAQIKMQVQKLNGVEGRMMRLAENCKISRDDFLIKYRSRELDPTWLDSISALP
GKGWKNLTTKHMDQLRNLRGEIAALSHETGLPVGEFRRVYATVSRGERDSTRAKKEMIEA
NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRS
IADQAKTIRIPVHMIETINKLVRTSRQMLHEIGREPAPEELAEKLGMPLEKVRKVLKIAK
EPISLETPIGDEEDSHLGDFIEDKTAVIPLDAAIQTNLREATTRVLASLTPREERVLRMR
FGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDDN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaaacagcctctggaacggatcggaacgcgcaggaacaggagggggatacc
actctccttgatacgcagtccgctgccgtcaagcggctgatcgccaaagggcgtgaacgc
gggcatatcacttttgatgaactgaatgcggtcctgccgcaggaccagatgtcttcggag
cagatcgaggacattatggcggccctgtcggaaatgggcattcaggtcatcgagaacgag
gaacaggacgaagccgagggccctgctgaaaaggaagccgaagctgagaccgaggaagcc
gaaggccctcagggcggcaacgtcgatgccgaggctgccagccgcacggatgatccggtc
cggatgtatctgcgtgagatgggttcggtcgagctgctgtcgcgcgaaggcgaaattgcg
atcgccaagcggatcgaagcgggtcgcgatgagatgatcggcggcctgtgcgagagcccg
ttgacgattcgcgccatcatttcctggcatgagcgcctcaaggacggcgagatgctcctg
cgtgacatcgtggatctcgaggccagtcaggggggtggtcccgaccccgatgcggtcgag
ggtgaagagggcgatgaggcgtctgaagaggacgacaaggccgaggacgagagcgaagag
ggcgacggcgagcagcaggaaggcagtggcctgtccctgtcggcgctggaagaaaagctg
aagccggaaatcctggcccgttttgaagccatcgagccgctgtatcacaagctgcgcaag
atccagatcaagcgtattgaagccctgacgggcggcgaggatcactcggacaagtctgag
cagacctatgaaaagctgcgtcatgagctggtcagtctggttgagcaggtgcatctgcac
aacaaccggatcgaggaactggtcgcgcagatcaagatgcaggtccagaagctgaacggc
gttgaaggccggatgatgcgtctggccgagaactgcaagatttcgcgcgatgacttcctc
atcaagtatcgcagccgcgaactggatccgacctggctggacagcatttccgcgctgcca
ggcaagggctggaagaacctgacgaccaagcacatggaccagctgcgcaatctacgtggc
gagattgcggcgctgtcgcatgagacgggcctgccggttggcgagttccgccgcgtctat
gcgaccgtttcccgtggcgagcgtgattccacgcgtgccaagaaggaaatgatcgaggcg
aacctgcgtctggtgatctcgatcgccaagaaatacacgaaccgtggtctgcagttcctg
gatctgatccaggaaggcaatatcggcctgatgaaggccgtggacaagttcgagtaccgt
cgcggttacaagttctcgacctatgcgacctggtggatccgtcaggcgatcacgcgttcc
atcgcggatcaggccaagacgatccgtattccggtccatatgatcgagacgatcaacaag
ctggtccgcacgtcgcgtcagatgctgcatgaaatcgggcgcgagccggctccggaagag
ctggccgagaagctgggcatgccgcttgaaaaggtccgcaaggtcctgaagatcgccaag
gagccgatctcgcttgagacgccgattggtgacgaggaagacagccatctcggtgatttc
atcgaggacaagacggccgttattccgctggatgctgcgatccagacgaatctgcgtgaa
gccacgacacgcgttctggcgtccctgacgccgcgtgaagagcgcgtgttgcggatgcgc
ttcggcattggcatgaacacggaccacacccttgaggaagtgggccagcagttcaacgtc
acgcgtgagcgtatccgtcagatcgaagcgaaggctttgcgcaagctcaagcatccgagc
cgttcgcgcaagctgcgctccttcctcgacgacaactga
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