Gordonia amarae: GII34_15400
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Entry
GII34_15400 CDS
T07320
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gam
Gordonia amarae
Pathway
gam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GII34_15400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gam03400
]
GII34_15400
Enzymes [BR:
gam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GII34_15400
DNA repair and recombination proteins [BR:
gam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GII34_15400
Prokaryotic type
GII34_15400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QHN22726
LinkDB
All DBs
Position
complement(3469181..3469861)
Genome browser
AA seq
226 aa
AA seq
DB search
MSPKPLSELIDPGWAEALAPVEPLVTQMGQFLRDEVAAGRKYLPAGANVLRAFTYPFDDV
RVLIVGQDPYPTPGHAVGLSFSVAPEVSPIPRSLSNIYTEYCQDLGYPMPANGDLTPWAS
NGVLLLNRVLTVQPGEPGSHRKKGWEQVTECAIKALVAREGEPLVAILWGRDAQSLEEWL
PDVPVIKSVHPSPLSASRGFFGSRPFSKANEALEDLGADPVDWRLP
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ttgagcccgaaacccctgtcggagctgatcgatccggggtgggcggaggcgctggccccc
gttgagccgctggtgacgcagatgggccagttccttcgggacgaggtcgcggccggtcgt
aagtacctgccggcgggtgcgaatgtgttgcgcgccttcacctatccgttcgacgacgtg
cgggtgctgatcgtcgggcaggacccgtatccgacgccggggcacgctgtgggcctgagc
ttctctgtggcgcctgaggtttcgccgatcccgcggtcgctgtccaacatctacaccgaa
tactgccaggacctcggctatccgatgcccgcaaacggcgatctcacgccgtgggcgagc
aacggcgtgctgctcctcaacagggtgctcactgtgcagcccggcgaacccggttcgcac
cgcaagaagggctgggagcaggtcaccgagtgcgccatcaaagccctcgtcgcgcgcgag
ggcgagccgttggtggcgatcctgtggggccgggacgcgcaaagcctggaggagtggctg
ccggatgtgccggtgatcaagtccgtgcacccgtcgccgttgtccgccagtcgcgggttc
ttcggctcccggcccttcagcaaggccaacgaggcgctggaggacctgggggccgatccc
gtcgactggcggctgccgtag
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