Gordonia amarae: GII34_15435
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Entry
GII34_15435 CDS
T07320
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
gam
Gordonia amarae
Pathway
gam00190
Oxidative phosphorylation
gam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GII34_15435
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GII34_15435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gam03019
]
GII34_15435
Enzymes [BR:
gam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
GII34_15435
Messenger RNA biogenesis [BR:
gam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GII34_15435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QHN24431
LinkDB
All DBs
Position
3474597..3476768
Genome browser
AA seq
723 aa
AA seq
DB search
MDGAVTSIPGAPPAATLSPDELTDLPDDRYLNRELSWLDFNSRVLALAEDTSQPLLERAK
FLAIFASNLDEFFMVRVAGLKRRDETGLSVRSADGLSPREQLQRIAGRTQTIADRHARVF
LDMVQPELAENNIHVVGWKDLSPQQRERLVEHFHEEVFPVLTPLAVDPAHPFPYISSLSL
NLAVTVRDSPEGPEHFARVKVPDNVKRFVRVDDLIPDPDASDEVPAKAVFLPTERLIAAN
LEHLFPGMEIADCHAFRVTRNADFEVDEDRDEDLLQALERELARRRFGSPVRLEVADDMS
EHMLELLLRELDVNPADVIQVPGLLDLTALFEIYGVDRPQLKDRPFVPATHPAFGERETP
RSIFATLNEGDVLVHHPYDSFSTSVQRFIEQAAADPQVLAIKQTLYRTSGASGDSPIVNA
LIDAAEAGKQVVALVELKARFDEQANIRWARKLEQAGVHVVYGLVGLKTHCKTCLVVRRE
GSTIKRYCHIGTGNYNPKTARLYEDMGLFTAAPDVGADLTDLFNTLTGYSRKTEYRNILV
APNGIRSGIIDRINVEIERGRAGDERARVQLKANALVDEQIIDALYRASQAGVPVEVMVR
GICALRPGMPGISDNIVVRSILGQFLEHSRILHFGAANEYWIGSADMMHRNLDRRVEVMV
QVRDAHSVAEIRDMFESAFDARTRCWALQSDGSWVASPAAGEEVRDHQLQMIKRHRRRPE
RSA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtggacggtgcggtgacctcgatccccggagcaccgccggcggcgacgctcagtcccgat
gaactcaccgatctccccgacgatcgttacctcaaccgggaattgagttggctggacttc
aactccagggtgctggcgctcgccgaggacacgtcgcagccgctgctggagcgggccaag
ttcctggcgattttcgcgtcgaatctcgacgagttcttcatggtgcgcgtggccggcctc
aaacgtcgcgacgagaccgggctgtcggtgcgttcggcggacggcctgtcaccgcgggaa
cagttgcagcgcatcgccggacgcacccagaccatcgccgaccggcatgcgcgcgtgttc
ctcgacatggtgcaaccggagttggcggagaacaacattcatgtggtcggctggaaggac
ctgtcgccacagcagcgcgaacgcctcgtggaacacttccacgaggaggtgttccccgtg
ctcaccccgctggccgtcgaccctgcccacccgttcccctacatcagcagcctgagcctg
aaccttgctgtgacggtgcgggattcacctgagggccccgagcacttcgcgcgtgtgaag
gtgcccgacaatgtgaagcgattcgtccgtgtcgacgacctgatccccgatcccgacgcc
tcggacgaggtgcccgcgaaggctgtcttcctgcccaccgaacggttgatcgcggccaac
ctcgagcacctgttccctggcatggagatcgccgactgtcacgcgttccgcgtcacccgc
aacgccgatttcgaggtcgacgaggaccgcgacgaggatctgctgcaggccctcgaacgg
gagctcgcccgcaggcgtttcggctccccggtgcggctcgaggtggccgacgacatgagc
gagcacatgctcgaactcctgcttcgtgagctcgatgtcaaccccgccgacgtgatccag
gtgcccggcctgctcgatctgaccgcgctgttcgaaatctacggcgtcgaccgtcctcag
ttgaaggaccgcccgttcgttcccgccacccaccccgccttcggcgagcgcgagacaccg
cgcagtatcttcgccacgctcaatgagggcgacgtcctggtccaccacccgtacgactcg
ttctccaccagcgtccagcggttcatcgagcaggccgcggccgacccgcaggtgctggcc
atcaagcaaaccctgtaccgcacgtccggcgcatcgggcgattcgccgatcgtcaacgcg
ctcatcgacgccgcggaggccggcaaacaggttgtggcgctggtggagctgaaggcccgc
ttcgacgaacaggccaatatccgctgggcccgcaaactcgaacaggcgggcgtgcacgtc
gtgtacggtctcgtcggactcaaaacccactgcaagacctgccttgtggtgcgccgcgag
ggctcgacgatcaaacgctactgccacatcggcaccggaaactacaatcccaagacagcc
cgcctgtatgaagacatgggcctgttcacggccgcaccggatgtgggcgccgacctcacc
gacctgttcaatacgctcaccggctactcccgcaagaccgagtaccgcaacatcctggtg
gcgccgaacgggatccggtcgggcatcatcgaccgcatcaatgtcgagatcgagcggggc
cgggccggcgacgagcgcgcccgggtgcagttgaaggccaacgccctggtcgacgagcag
atcatcgacgcgctctaccgtgcctcgcaggccggcgtgcccgtcgaggtgatggtccgg
ggcatctgcgcgctgcggcccggcatgccggggatcagcgacaacatcgtcgtgcgctcc
attctcggccagttcctggaacattcgcgcatcctgcatttcggcgccgcgaacgaatac
tggatcgggtcggccgacatgatgcaccgcaatctcgaccgccgcgtcgaggtgatggtg
caggtgcgcgacgcgcactcggtcgccgagatccgggacatgttcgagtccgccttcgac
gcccgcacccgatgctgggcgttgcagtcggacggcagctgggtggcctcccccgctgcg
ggtgaggaagtccgcgaccatcagctgcagatgatcaagcggcaccggcgcaggcccgaa
cggtccgcctga
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