Grus americana (Whooping crane): 129199080
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Entry
129199080 CDS
T11359
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein isoform X1
KO
K12600
superkiller protein 3
Organism
game Grus americana (Whooping crane)
Pathway
game03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129199080 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
game03019
]
129199080 (SKIC3)
Messenger RNA biogenesis [BR:
game03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
129199080 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129199080
NCBI-ProteinID:
XP_054664820
LinkDB
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Position
Z:complement(86334717..86384355)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKDYKEALKHCKAVLKQDKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAVELEPNQLLAWQGLANLYEKSSQTDVKGDLADVYQKLLQLYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETWRKLIQMKQEEGAEKAELHQLWKKMIHLLKDTTQSQDNKTEQ
LLLTAFEHAVNSADTVPGEDHQNLYKDFIQCLSKFPHETTRLEKACNDMMALYPTMTYPL
EVLCLHFVQSGTLSEEALQCFSRLLEMDASSGPGIIGFGIKCLQEKKYKEAVKSLTEGLQ
KTSQCPAAWHYLAEAQMKIHKHRDAVLSCNQALEALGTPEGHSLHWKNLSLQLKAEALIK
IADADAAEEAIKALEQIVDASSDPVVLAIRGQAYLNKGLMDQASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAERSFLSAIQRKAETAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDRTDEESGTAAVDLSMELG
DMDTALSILNEVTEKASTGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLSRGSYSTALKSFRKASELNPELVYSIYRAAAVEQILGKYENAIATYQQILKET
EDYVPALKGLGECYLMLARSALDNYLDRKAVDYIEQALEFFTRATKHRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVLGSLLGKNAGKQMLNKIELLRLGGRCYGRALKLMPLPSMWCDL
GINYYRQAEHLTAVGTDMNEISELLEKSLQCLKKAVRLDSKNHLSWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLTTGNIEQAHEAFKIAQSLEPSYLLCWIGQA
LIAERVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKSNRNTELYLYNIVQMNAI
PTAQVVLTKYVERDPDDASAFTMLGYLNEYLNLKQQARDAYERAASLLKNSEDTEKYNTA
MQNYGRSLCALGQCDKAIEVYTSTPLTDFDGIVGIALAYFKKGLLQESIKAYEKALSIAE
SEQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHDKGDDTINERCLIASAVYALQGRNVGVQREVSKAIHSNPDNPALWSLLSRLV
PLYASQKTKGGAVAGNIAYVLDVNHGKEVLLNIAVNQLAAGCHMLEDEKNNPLKNIQKAI
HLCPDNPAAWAVLMAACHAENTIVCLNNTQPKRTDLEMTLLSTVSAKTGENNLPQNYIQT
VEDWCLCQAITSLEETGKLSEAEALCTKGLKRCPEHPALFLLLRQVQCKQLLQSHKELPE
NILEELHKTVMSSSTSVAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWNEKLSSL
LGLAMLALEVCRANVSNEHWPSLVREATTEALKLSPCPLAALLQALLQYNRKMGARETRR
LLERVVYQPGNPETIVSVARWYLLQHLYAKDDYELIDVLIENAKANGDVRALELNEKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaggaggtgaaggcagcattaaagagtgctagagatgcaatacgaaataaa
gattataaggaggccttaaaacactgcaaggcagtcttgaagcaagacaaaaataactac
aatgcttgggtgtttatcggcctggcagctgctgagttagagcagcctgatcaggccaaa
ggagcatataagaaggctgttgaacttgaaccaaaccagctgctggcatggcagggatta
gcaaatttgtatgagaaatccagccaaacagatgtcaaaggagacttagcagatgtttac
caaaagcttttgcaactctatgaaagtggtgacaagcagaaatggtgtgatgtgtgtaac
aagcttgtggaactatatcaccaagaaaagaaatatttagaggtcgctgaaacatggcgg
aagctaatacaaatgaaacaggaggaaggtgcagaaaaggcagagcttcatcagctttgg
aagaagatgatccacttactgaaagacactacacagagtcaggataataagacagagcag
ttgcttttgactgcgtttgaacatgcggtgaactctgctgacactgtccctggtgaagac
caccaaaatctttacaaggacttcattcagtgcttgtcaaaatttcctcatgaaactact
aggttggaaaaggcctgtaatgatatgatggctttgtatcctactatgacttatccttta
gaagtactttgcctgcactttgttcagtcaggtactttgtcggaagaggccctgcagtgt
ttttctaggcttttggagatggatgcaagcagtggtccaggaatcattggttttggtata
aaatgcctccaagaaaagaaatacaaggaggctgttaagagtcttactgaaggtttgcag
aagactagccagtgtccagcagcgtggcattatttggcggaggcacagatgaaaatacat
aaacacagggatgctgtcctgtcctgcaatcaagctctcgaggctcttggaactcctgag
ggtcatagtcttcactggaagaatcttagccttcagttgaaagcagaggctttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagattgtggatgca
agcagtgatccagtggttttagctatcagaggtcaggcttatctaaacaaaggtttaatg
gatcaagcttcaaagatttcgcaggagcttctgttgtcccaccctgatctggccgagtcc
catgctctagaaggtttcatccattattcccaaaagaactatgaacaggcagaaagaagt
tttctaagtgctattcaaagaaaggctgaaactgcggagtatcatcagtacttggggctc
acatactggttcatgagcgatgagacaaaaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagatattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatagaaccgatgaagaatctggaacagcagctgtagacttaagcatggaacttgga
gacatggacactgctctgtcaatcctgaatgaggtaactgaaaaagcgagtactggtaca
gcaaaatgggcctggcttcatcgtggactttactacctgagaactggtcagccgtcacaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctaggggaggcttacttgagcagaggtagctattcaacagctctaaaatccttcagg
aaagcaagtgagctgaacccagagctcgtgtacagcatttacagagctgcagcagttgag
cagattctaggcaaatatgaaaatgctatagctacctatcaacaaatcttaaaggagaca
gaagactatgtgcctgcactgaaaggacttggtgagtgctatcttatgctggcaagatca
gcccttgataactatcttgataggaaggctgtggattacatagagcaggctcttgaattt
tttacaagggcaacaaagcaccgtcctgatgtatcttgcctctggaaactgcttggagat
acctgtactagtgtgcatgttatttcaccaaccaaagtgaatgttcaagttctaggatct
cttctgggtaaaaatgcaggcaagcagatgctgaacaaaattgagctgctcagactggga
ggaaggtgttacggcagagctttaaaattgatgcctttgcctagcatgtggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcagtgggcactgacatgaatgag
atcagtgaactgctagagaagtctttacagtgtctcaaaaaagctgtaaggcttgacagc
aaaaatcatctttcctggaatgcacttggtgtagttgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgttgtt
gcctggaccaacttgggggttttgtatttgacaactggaaacattgagcaagctcatgaa
gccttcaagatagcccagtctctggagccttcttacttactgtgttggattgggcaggct
cttattgcagagcgggtaggcagctatgatactatggatctcttcaggcacacgactgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtatgttcaacgctgcaa
gataagagcaacagaaacactgaactgtatctgtacaacattgttcaaatgaatgctatt
ccaacagcccaggtggtcttgaccaaatatgtagaaagagatccagacgatgcgtctgct
ttcacgatgcttggttatttgaatgagtatctgaatctaaaacagcaggcaagagatgct
tatgagagggcagcttcgttgctgaaaaactctgaggatactgagaaatacaatacagca
atgcaaaactatggcaggtcattgtgcgcccttggtcagtgtgataaggccattgaggtt
tacacatcgacacccctaactgattttgatggcattgtggggatagcattagcctacttc
aaaaagggactcttacaagaaagtatcaaagcctatgaaaaagccttgtctattgctgag
tctgaacaagataaagcacatatcctgactgccttggcaattatagagtataaacagaac
aaagtggatgctgcaaagacgctgctgtttaagtgctcattaaaggaacctagtacggaa
agtctgaaggctttgtgcacactaggactggtaaagcaggatgctacacttgcaacagca
gccctaaaagaattactgaagcacgacaaaggggatgatacgattaatgagaggtgcctt
attgcatctgctgtttatgcattgcaaggtagaaatgtgggggtccagagagaagtctcc
aaagcaatacacagtaaccctgataatcctgccctctggtctcttctgtctcgactagtt
ccattgtatgcatcgcaaaagacaaaaggaggagcagtggcaggaaacatcgcatacgta
cttgatgtaaaccatggaaaggaagtcctgctgaatattgcagttaatcagttggcagca
ggatgtcacatgttagaagatgagaaaaacaatcctctgaaaaatattcagaaggcaatc
catctctgtccagataatcctgctgcctgggcagtgctaatggcagcttgtcatgctgaa
aacaccattgtctgcctaaacaacactcagccaaagcgaacagatttagagatgacactt
ttatctacagtttcagccaaaactggagaaaataaccttccacagaattacatccagact
gttgaagactggtgtctatgtcaagctattaccagtttagaggagactggtaaactctca
gaagctgaagctctttgtaccaagggtttaaaacgctgtcctgagcacccagctctgttt
ttgcttttgagacaagttcagtgtaagcagctgttgcagtctcacaaggaacttccagaa
aacatcctggaggagcttcacaagacagtcatgagcagttcaacttcagttgcagcctgg
cagtggctggcaaaagtgtatcagtctcaaagaatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcgtcacagcagggcagctggaatgagaagttatccagtctc
ctcgggctagctatgctcgcactggaagtctgcagggctaatgtctcaaatgagcactgg
ccatccttggttcgggaggcaacaactgaagctttgaaactttctccttgccccctggca
gctctcctacaagcactgctacagtataatcgcaaaatgggagcaagggagacccgtcga
ttgttggaaagagtggtttatcaaccagggaatccagaaaccatagtgtcagtggctcgc
tggtacctcctgcagcatctgtatgccaaagatgattatgaattaatagatgtgcttata
gaaaatgccaaagctaatggagatgttagagctctggaactaaatgagaaattgtcagca
agtgcctag
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integrated database retrieval system
