Grus americana (Whooping crane): 129204640
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Entry
129204640 CDS
T11359
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
game Grus americana (Whooping crane)
Pathway
game04510
Focal adhesion
game04512
ECM-receptor interaction
game04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
game00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129204640 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129204640 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129204640 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
game00535
]
129204640 (COL9A1)
Proteoglycans [BR:
game00535
]
Extracellular matrix (ECM) proteoglycans
Others
129204640 (COL9A1)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
129204640
NCBI-ProteinID:
XP_054676952
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Position
3:complement(32644368..32719629)
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AA seq
919 aa
AA seq
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MKSNWKITASFYVCSFLWSFISATIQQQSRLPVILGASQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAAAQGIIQRVVGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGQMKSVEFSYKGADGNLQTASFLHLPFLFDSQW
HKLMISVEANSVTLFIDCIKIETLNIKPKGKISVDGFAVLGKLKNNPQISVPFEIQWMVI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPDGPPG
PPGPDGDAGKPGSPGLPGEPGADGFTGPDGSSGATGPKGQKGEPGLPGARGLPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGSPGPPGPRGTIGLQDGDPLCPNACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGT
KGARGLDGEPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGPKGEPGLPGV
DGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGMKGIPGPKGNRGPPGVPGLMGN
SGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPPGLLGG
KGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGDPGSRGPEGSRGL
PGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLAQLAASLR
RPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE
RGFPGRGPKGYPGPRGLPGEPGKPSYGREGRDGERGLPGVAGQPGVPGPPGPPGPPGYCE
PSSCRMQAGQRAGKNVKGP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaactggaaaattacagcttccttttacgtgtgtagttttctgtggtctttc
atctcagccaccatccagcaacaatcaagactaccagtcattctgggtgccagtcagaga
actgatctctgcccaacaatcaggattggccaagatgacttgccaggctttgacctgatt
tctcagttccaaatagaaaaagctgctgctcaaggaattatccagagagtagtgggctcc
acttctctacaagtggcttataaattgggacccaatgtagacttcaggatcccaaccagt
gccatatattccaatggactgcctgatgaatattcctttctaactacttttcggatgact
ggggccacacttcagaaatactggactatttggcagattcaggattcttcaggaaaagaa
caagtcggagtgaatcttaatggtcaaatgaaaagtgttgagttttcttataaaggagcg
gatggaaatctccaaactgcatcatttttgcatttgcctttcttgttcgactcccagtgg
cacaagcttatgataagtgtggaagcaaacagtgtcacgctttttattgactgtattaaa
attgaaactttaaacataaaaccaaaagggaaaatcagcgttgatggcttcgctgtgctt
ggaaaacttaaaaataatcctcaaatttcagttccgttcgaaatccagtggatggtgatt
cactgcgaccccctgcgaccccagcgcgaaggctgcggcgagctgccggcccggataagc
cagacggtaatcgagagaggtctccctggtccaccaggccccccgggtccgccagggcca
ccaggagttcccggtattgatggcattgatggggagagaggtcctgatggcccccctggt
ccaccgggtccagatggggatgcaggcaaaccgggatcccctggcctgcctggagagcca
ggagctgatggattcacaggacctgatggttcaagtggagccacaggaccaaaaggacag
aagggtgaaccaggactgccaggtgctcgtggactgccgggcaaggggcttcttggacca
cctggtccagctggtgcagcaggacttcctggggaagtaggtcgtgcaggtccacctgga
gatccaggaaaaagagggccaccagggtcaccaggaccacctggtcctcggggaacaatt
ggcctgcaagatggtgacccattgtgtcccaatgcttgtccacctggccgcccaggacat
gctggtttaatgggaatgaaggggcagaaaggttcaaaaggagagtctggtgaaccagga
aaacaaggttataagggtgaagaaggggaccaaggacccagtggtgaagtgggagctcaa
ggccctccaggcatcctaggtatcagaggtataactggtataatgggacctaaaggtacc
aaaggagctcgtgggcttgacggtgagcctggtcctcaaggtcttcctggtgcacctggg
gatcaaggacagagaggtccactgggagaggcaggtccaaagggagaaaggggccctcaa
ggtacaagaggaataaatggtctccctggacctaaaggagagcctggcttaccaggagtc
gatggccgggaagggatccctggaatgcctggagcaaaaggtgaaccaggaaaacccgga
gctccaggtgatgcagggcttcagggactgccaggtttaccaggctctccaggtatgaaa
ggcattcctggcccaaagggtaatagaggtccccctggggtgccaggtttgatgggaaat
tctggtaaaccgggtgaacaggggccagagggagaagcaggtccaacaggaccccgagga
ccaccaggtagcagaggggagccaggtcctgcgggtcctccaggtttaccagggaaatgg
ggtccccagggtgatatcggacttcctggactgccaggtcctccaggcctacttggtggt
aagggtgaccggggttcagtgggtgaaccgggacctaagggtgaacaaggtgcacctgga
gcagaaggagatggaggagaaaagggtgacttaggtgatatgggattaccaggagcaaag
ggagctgttgggaatcctggagatcctggttcccgtgggcctgagggaagccggggactg
cctggcatggaagggccacgaggctcacctggaccgcgaggtttgcagggtgaacagggt
gccccaggtctgcctggcagccaaggtccagctggaaaagaaccaaccgatcagcacatt
aagcaggtttgcatgagagtcatgcaagaacaactagctcagctggcagccagtctcagg
aggccagaattcggtgctccaggtcttcctggccgaccggggccaccaggtgctccaggg
cctgctggtgaaaatggcttcccaggacagcttggaccccgtggcttgcctggccttaaa
ggtccccctggtgagatcggtcgtaaaggtcctaaaggtgaaccaggagaaagaggagaa
agaggatttccaggcagaggaccgaaaggttaccctggaccaagaggtcttccaggtgaa
ccaggcaaacccagctatggcagggaaggccgtgatggtgaacgaggtctccctggggtg
gccggtcagcctggggttccgggtcctcctggccctcctggccctcctgggtactgcgag
ccatcgtcttgcaggatgcaggctggacagagagctggtaagaacgtgaaagggccatga
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