Grus americana (Whooping crane): 129209825
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Entry
129209825 CDS
T11359
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
game Grus americana (Whooping crane)
Pathway
game04136
Autophagy - other
game04140
Autophagy - animal
game04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129209825 (ATG16L1)
04136 Autophagy - other
129209825 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129209825 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
game04131
]
129209825 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
game03029
]
129209825 (ATG16L1)
Membrane trafficking [BR:
game04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
129209825 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
129209825 (ATG16L1)
Mitochondrial biogenesis [BR:
game03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129209825 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129209825
NCBI-ProteinID:
XP_054690802
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Position
9:3086615..3108908
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AA seq
624 aa
AA seq
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MASGLRAAGFPPWKRHIAAELRRRDRLQRQAFEEIIGQYNKLLEKSDLHAVLADKLQAEK
YDVQSRHEISPGHDGAWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRNKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDD
IEVLADETSDTAEETSPVRAVGRTSSKRLSQPAGGLLDSITNIFGLSESPLLGHQSSDAA
RRRSLSSFPAPQDNVEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVSAVK
QTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAV
AWSPAGAHVVSVDKGNKAVLWSEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgccgccggtttccccccctggaagcggcacatcgcggcggag
ctgcggcggcgggaccggctgcagcggcaggccttcgaggagatcatcgggcagtataac
aagctactagagaagtcagaccttcatgcagtactggctgataagcttcaagcagaaaaa
tatgacgtgcaaagcagacatgagatcagtccagggcatgatggcgcatggaatgatgct
cagttgcaggaactggcacagctgaagataaagcatcaagaggagctgacagagctgcat
aagaaacgtggcgagttggcccagtctgtaattgatctgaataaccaaatgcagcagaag
gacaaagagatgcagatgaatgaagcaaagattgcagagtatttgcaaaagatctctgaa
ctggaaacagagtgccaggaattgcgtaacaaactgcaagatcttgagcgagctaatcag
acactgaaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaaactg
aggaaaactactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaa
gaagccaatcgtttgaatgcagaaaatgaaaaggattcaaggagacgacaagccaggctg
caaaaggagctagcagaagctgccaaagaacccctgcctgttgaacccagggatgatgat
attgaagtgcttgcagatgaaacgtctgacacagctgaggagacatctccagtgcgagct
gtcggccgaacttccagtaagcgactctcccagccagctggaggccttctggactctatc
actaatatctttggtctgtctgagtctccccttttgggacatcaatcttctgatgctgcc
aggaggcgttctttgtcctcgttccctgctccccaggataatgtagagccacatccaggt
gccagtaaagaagtgagagtgcccactactgccatatgtgtcttcgacgcacatgatggg
gaggtgaatgcagtgcagttcagccctggctcccggttactagcaacaggaggcatggac
cggagggttaagctttgggaagtcttgggagataggtgtgagcctaaaggttccctctct
ggtagtaatgctgggattacaagcatagaatttgatagtgctggttcttacctcttggca
gcttcaaatgactttgccagcagaatctggacggttgatgacaatcgattacggcacacc
ctgacaggtcacagtggtaaagttctgtcggccaagttcttgctggacaatgcacgcatt
gtttcaggaagtcatgaccggaccctcaagctctgggacctccgcagcaaagtttgtata
aaaacagtgtttgcaggatctagctgcaatgacatcgtatgtactgagcaatgtgtaatg
agtggacactttgataagaaaattcgtttctgggacatcaggactgaaagcatagtaaaa
gagctggagctgcttggaagaatcacagctctggacctgaactcagagcgaacagagctt
ttgacctgttcccgtgatgatctactaaagatcattgatctgcgggttagtgctgtcaag
cagacattcagtgcccagggattcaaatgtggctctgactggacgagagttgtgttcagc
cctgatggtaactatgtggctgctggttcagctgatggggccctctacatttggaatgtg
ctcactgggaaattggagaggacgcttgcaaagcatcacagttcttctatcaatgcagtc
gcatggtcaccagcaggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtcctg
tggtctgaattttga
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