Grus americana (Whooping crane): 129214203
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Entry
129214203 CDS
T11359
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
game Grus americana (Whooping crane)
Pathway
game03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129214203 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
game03041
]
129214203 (PRPF6)
Spliceosome [BR:
game03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129214203 (PRPF6)
Complex C
U5 SnRNP specific factors
129214203 (PRPF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_17
TPR_2
TPR_8
FAT
ARM_TT21_2nd
TPR_CcmH_CycH
TPR_1
ARM_TT21_N
ARM_TT21_C
ARM_TT21_5th
TPR_21
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
129214203
NCBI-ProteinID:
XP_054701471
LinkDB
All DBs
Position
17:10149205..10175999
Genome browser
AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQSGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE
QKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CENAEPRHGELWCDVSKDIENWQKKIGEILVLVAAKLKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcctgggcatgcccgcgcccctgggctacgtgccgggg
ctgggccgcggagccacaggttttaccacccgctccgatattggccctgcacgtgatgca
aatgaccccgtggatgatcgtcatgcgcctccggggaagaggactgttggggatcagatg
aaaaagaaccagacagctgatgatgatgatgaagatttgaacgacaccaattatgatgag
ttcaatgggtatgctgggagcctgttctcaagtggtccctatgaaaaagatgatgaggaa
gcagatgctatttatgcagctttggataagaggatggatgaacgcagaaaagaaagaagg
gaacaacgagaaaaagaggagatagaaaaataccgtatggaacgacccaaaattcagcag
cagttctcagacttgaaacggaagctagcagaggtcacagaagaagagtggctgagtatt
ccagaagttggtgatgccaggaacaagcgtcagaggaatcctcgttatgagaagctgact
cctgtacccgacagcttctttgcaaagcatttacagtcaggggagaatcacacttctgtg
gacccacgccaaacacaatttggtggattgaatactccatacccggggggcttgaatact
ccgtacccaggaggaatgacaccaggcttaatgacacctgggacaggcgaattggatatg
aggaagattggccaagccaggaacaccttgatggatatgaggctaagccaggtgtcggac
tctgtgagtggccagactgtagtggacccgaaaggatatttgacagacttgaattcgatg
attcccacgcatggaggagatatcaatgacatcaagaaagcccgtttgctcctgaaatct
gtacgagagaccaatcctcatcatccgccagcctggatagcatcagcccgactggaggag
gtcactggcaaactccaagtggctcgaaacctcatcatgaaaggaacggagatgtgcccc
aagagtgaagatgtttggttagaagctgctcggcttcagcctggggatacagccaaggct
gttgtggcccaagctgtccgccaccttccacagtctgtccgaatctatataagagcagca
gagctggagacagatatccgtgcaaagaaacgtgtccttaggaaagcccttgagcatgtt
ccaaattcagtgcgtttgtggaaagcagccgtggagttagaagaacctgaggatgccagg
atcatgctgagtcgggctgtggagtgctgtccaactagcgttgaactgtggcttgcactg
gcaaggctggagacatatgagaatgctcgtaaagtccttaacaaagcccgtgagaatatt
ccaacggatcgtcacatctggattactgctgccaaactggaggaagccaatggaaacacc
cagatggtggagaaaattattgacagagccatcacatctcttagggctaatggtgtggaa
atcaacagagagcagtggatacaggatgccgaggaatgtgataaagctggaagtgtggcc
acgtgccaggctatcatgcgagctgtgattgggattgggattgaggaagaagatcggaag
catacctggatggaagatgcagacagttgtgttgctcataacgctctggagtgtgcccga
gcgatttatgcctacgccttgcaagttttcccgagcaagaagagtgtgtggctgcgagca
gcgtactttgaaaagaaccacggaaccagagaatccttggaggctcttttgcagagagct
gttgctcactgtcccaaagcagaagtgctctggctcatgggagccaaatcgaaatggcta
gcaggagatgtgccagcagccagaagcattttggcactggctttccaggccaaccccaac
agcgaggagatctggctggctgccgtgaagcttgagtcagaaaacaatgaatatgaaaga
gcaaggaggctgctggcaaaagctcgcagcagtgcccccactgcaagggttttcatgaag
tctgtgaaattagaatgggtacttgggaacattgctgcagcccaggagctttgtgaggaa
gccctgaagcactatgaggacttccccaaactgtggatgatgaaaggacaaatcgaggaa
caaaaagagctggtagagaaagcacgagaggcttataatcaagggttgaaaaagtgcccc
cattccatacccctgtggcttttgctgtccaggctggaggagaaagttgggcagttgact
agagcaagagccatcttggaaaagtctcgcctaaagaatccaaagaatccagatctctgg
ttagagtctgtgcgattagagtacagagctgggctaaagaacattgcaaatactctgatg
gccaaggcattgcaagaatgtcccaattcaggaatcctgtggtcagaggcaattttcctt
gaagcgcgaccgcaacgaaagaccaagagtgtggacgctctcaagaagtgtgaacatgac
ccacatgtcctgttggctgtggccaaactgttctggagtgagcgtaaaataaccaaggcc
cgagagtggttccaccgaaccgtgaagatcgactctgacctgggggatgcttgggctttc
ttttacaaatttgagctccagcatggcacagaggaacaacaagaagaggtgaggaagcgc
tgtgagaatgctgaacctcgccacggagagctctggtgtgacgtctccaaggacatagag
aactggcagaaaaagatcggagagattcttgtgcttgtggcagccaagcttaaaaatacc
ttctag
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