Gracilinanus agilis (agile gracile opossum): 123231772
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Entry
123231772 CDS
T07702
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
KO
K14299
nucleoporin SEH1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03013
Nucleocytoplasmic transport
gas04150
mTOR signaling pathway
gas05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123231772 (SEH1L)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
123231772 (SEH1L)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123231772 (SEH1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123231772 (SEH1L)
04131 Membrane trafficking [BR:
gas04131
]
123231772 (SEH1L)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123231772 (SEH1L)
Membrane trafficking [BR:
gas04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
123231772 (SEH1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
123231772
NCBI-ProteinID:
XP_044514011
LinkDB
All DBs
Position
1:560037929..560055035
Genome browser
AA seq
496 aa
AA seq
DB search
MLALQESAHLYGLPISGVGGVGAHAHSLQLAGCARSGRPVHGGPACSRGGLRKSEAQGSS
RVGGNLAVAAVMFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHC
TASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTL
VDSRTSVTDVKFAPKHMGLMLATCSADGVVRVYEAPDVMNLSQWSLQHEISCKLSCSCIS
WNPSSSRAHPPMIAVGSDDSSPNISAKVQIYEYNENTRKYAKAESLMTVTDPVHDISFAP
NLGRSFHILAVATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNIT
GTVLASSGDDGCVRLWKANYMDNWKCTGVLKGNGSPVNGSSSQQGISNASLGSNNPNLQN
SLNGSSTSRYFFPPLDSPRAGSRWSSYAQILPPPPPPPPPLIEHSCDADTANLQYPHPRR
RYISQPLNPLPENEGV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctggcactgcaggaaagcgctcatttgtacgggcttccaattagtggagtcggggga
gtgggtgcgcatgcgcattctctccagctagccggctgtgcgcgttcgggacgccctgtg
catggaggcccggcgtgctctaggggaggccttcggaagtctgaggctcaaggctcaagt
cgagtaggcgggaacctcgccgtggcggcagtgatgttcgtggcgcgcagtatcgcggcg
gatcataaggatctcatccacgatgtgtcctttgacttccacgggcggcgaatggcgact
tgctccagtgaccagagtgtgaaggtctgggacaaaagtgaaagtggggattggcactgc
actgctagctggaagacacatagtggttctgtgtggcgtgtgacctgggcacatcctgaa
tttggacaggttttggcttcctgttcttttgacagaactgctgctgtttgggaagaaata
gtgggagagtccaatgacaaacttcgaggacaaagtcattgggttaagaggaccactttg
gtcgatagcagaacatcggttactgatgtgaagtttgctcctaagcatatgggtcttatg
ctagcaacctgttcagcagatggtgtggtgagagtatatgaagctccagatgttatgaat
cttagtcaatggtcattgcagcatgaaatctcatgtaagctaagctgtagttgtatttca
tggaatccttcaagttctcgtgctcatccccccatgatagctgtaggaagtgatgacagt
agtccaaatatatctgctaaggttcagatttatgaatataacgaaaacaccaggaaatat
gcaaaagcagaatcccttatgacagtcactgatcctgtacatgatatctcatttgcgcca
aatttgggacgatcattccatatcctagccgtagcaaccaaagatgtgaggattttcacg
ttaaaacctgtaaggaaagaattaacttcttctggtggtccaacaaaatttgagattcat
atagtagctcaatttgataatcacaactctcaggtttggcgagtgagttggaatataaca
gggacagtactagcatcatctggagatgatggctgtgtaagattgtggaaagctaattat
atggacaattggaagtgtactggtgttttgaaaggtaatgggagcccagtcaatgggagc
tcttctcaacagggaatctcaaatgcttctttagggtcaaacaatccaaatctacaaaat
tcactcaatggatcttcgactagcaggtatttctttccccctctggattccccacgggct
ggatcaagatggtccagttatgcccagatccttcctcctcctcctcctcctcctcctcct
ctgatagagcactcttgcgatgctgacactgccaacctccagtatcctcaccctcgcaga
cgatatatctctcagcctcttaatcccttacctgagaatgaaggagtttaa
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