Gracilinanus agilis (agile gracile opossum): 123232255
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Entry
123232255 CDS
T07702
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03018
RNA degradation
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123232255 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
123232255 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123232255 (LSM4)
03041 Spliceosome [BR:
gas03041
]
123232255 (LSM4)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123232255 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
123232255 (LSM4)
Spliceosome [BR:
gas03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123232255 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
123232255
NCBI-ProteinID:
XP_044514582
LinkDB
All DBs
Position
1:732641657..732655269
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AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGVQQQKQQKGRGAGGAGRGVFGGRGRGGI
PGSGRGQQEKKPGRQAGKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccttatccttattgaagacagcccagaatcaccccatgttggtagaactaaaa
aatggtgaaacctacaatgggcaccttgtgagctgtgataactggatgaacatcaatttg
agagaggtcatctgtacatccagggatggtgacaaattctggcgcatgcctgagtgttat
atccgaggcagcaccattaaatacttgcggattcctgatgagattattgacatggtaaaa
gaagaggtggtgtccaagggcagaggccgcggtggtgtgcaacagcagaagcagcagaag
gggcgtggagcaggtggagctggccgaggtgtgtttggaggccgaggccgagggggcatt
ccaggcagcgggagaggacagcaggagaagaagccaggccggcaggctgggaagcaatga
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